Add test for IDO parents

sorgerlab · Jul 8, 2021 · a5fbf89 · a5fbf89
1 parent f2a2963
commit a5fbf89
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Showing 2 changed files with 6 additions and 1 deletion.
diff --git a/indra/tests/make_mock_ontology.py b/indra/tests/make_mock_ontology.py
@@ -45,7 +45,7 @@
     'CHEBI:CHEBI:136692', 'EGID:1022', 'HGNC:1778',
     'CHEMBL:CHEMBL296468', 'UP:P41180', 'MESH:D000077191',
     'MESH:C475455', 'MESH:D015032', 'CHEBI:CHEBI:27363', 'CAS:7440-66-6',
-    'EGID:673', 'EGID:5594', 'EGID:5595'
+    'EGID:673', 'EGID:5594', 'EGID:5595', 'IDO:0000514'
 }
 
 always_include_ns = {'FPLX', 'INDRA_ACTIVITIES', 'INDRA_MODS'}

diff --git a/indra/tests/test_ontology.py b/indra/tests/test_ontology.py
@@ -331,3 +331,8 @@ def test_standardize_hgnc_fplx_mesh_bug():
     assert refs['MESH'] == 'D044169'
     assert refs['HGNC_GROUP'] == '279'
     assert 'HGNC' not in refs
+
+
+def test_ido_parents():
+    parents = bio_ontology.get_parents('IDO', '0000514')
+    assert ('IDO', '0000509') in parents