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command-line | ||
api | ||
api-example | ||
requirements | ||
more-info | ||
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Computational requirements | ||
========================== | ||
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sourmash has no particular memory requirements; it will need to hold | ||
the largest single sequence you have in memory, but the individual | ||
signatures are quite small and we do no special buffer allocation. | ||
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sourmash's intensive computation is almost entirely computing k-mers | ||
and hashes of k-mers. It will create a sketch of several megabases | ||
in a second or so on a rather slow 2016 Mac laptop. | ||
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MinHash sketches and signatures are quite small on disk. | ||
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sourmash should run with little modification on Linux and Mac OS X, | ||
under Python 2.7.11 and Python 3.5. Please see `the development | ||
repository README | ||
<https://github.com/dib-lab/sourmash/blob/master/README.md>`__ for | ||
information on source code, tests, and continuous integration. |