Skip to content

Commit

Permalink
update urchin
Browse files Browse the repository at this point in the history
  • Loading branch information
ctb committed Jun 11, 2016
1 parent 3e9e1cc commit b1aee48
Show file tree
Hide file tree
Showing 206 changed files with 21,724 additions and 11,483 deletions.
163 changes: 107 additions & 56 deletions urchin/abyssicola-SRR3217899.sig
Original file line number Diff line number Diff line change
@@ -1,61 +1,112 @@
class: sourmash_signature
email: titus@idyll.org
filename: SRR3217899_1.fastq.gz.trimnoV.fq.gz
name: abyssicola
hash_function: 0.murmur64
name: Ophiactis abyssicola
signatures:
- ksize: 32
md5sum: 3892c4855876361da531b077730ca278
mins: [0, 128, 1207, 15602, 16714, 17871, 20547, 25395, 25918, 31170, 38169, 40759,
44903, 47823, 55889, 59484, 60917, 62313, 63321, 64425, 66342, 70346, 70863, 71641,
74392, 76094, 78484, 80508, 80676, 84800, 85230, 91266, 91735, 93050, 97457, 97473,
97828, 100836, 102128, 102578, 103097, 106237, 107806, 109185, 114594, 117277,
123806, 126283, 126663, 128486, 128991, 132088, 133890, 139091, 139585, 142085,
142481, 144834, 152495, 153437, 159636, 159920, 161555, 163619, 164458, 166960,
169435, 174610, 176171, 179886, 181769, 182800, 183266, 190902, 191123, 195537,
197431, 199101, 199254, 205252, 206398, 211714, 212222, 213391, 215058, 216181,
225139, 229339, 231605, 232515, 232521, 233682, 235844, 237778, 238908, 240578,
242879, 244544, 248102, 249489, 249694, 262739, 265713, 267277, 269216, 270268,
270331, 270610, 276905, 278160, 278436, 278838, 278892, 281143, 281556, 282597,
283174, 283264, 285791, 286392, 287406, 287625, 288271, 290047, 297249, 299198,
306996, 309302, 312472, 315345, 317345, 320036, 321094, 321895, 322362, 324015,
324611, 325335, 326514, 330243, 335969, 338690, 342793, 343747, 344977, 345237,
349292, 352635, 366597, 366824, 374296, 375357, 377572, 388708, 395539, 395746,
399313, 401764, 402026, 402820, 403605, 404311, 408080, 410748, 414151, 416201,
418127, 418535, 420286, 421960, 422511, 423868, 424632, 425334, 427710, 431795,
434052, 434420, 435341, 440887, 442986, 449842, 450953, 452426, 452473, 455520,
456005, 456916, 457758, 457772, 460200, 460323, 461460, 464485, 467107, 469627,
476602, 477275, 478627, 480179, 480992, 481722, 481789, 483028, 483232, 484232,
489263, 497528, 498331, 503281, 506404, 508622, 510963, 517366, 522174, 523685,
529405, 531209, 533263, 534892, 541318, 542020, 547182, 548383, 549375, 549937,
553514, 558944, 559186, 560312, 562347, 562424, 562831, 564228, 565759, 566312,
567422, 568242, 571686, 575096, 577406, 579387, 579727, 581370, 581519, 582069,
586849, 588331, 588996, 589963, 592097, 593141, 593695, 597464, 601762, 603263,
605477, 608505, 610621, 611521, 612424, 612575, 614895, 622819, 624058, 624551,
625305, 626885, 627500, 631546, 635287, 636703, 640316, 641507, 643038, 643463,
646307, 646749, 649345, 650093, 652246, 656154, 656563, 658490, 658732, 660176,
661002, 663091, 664638, 665017, 665645, 668190, 671386, 671790, 673937, 674313,
675872, 683657, 685106, 686205, 691028, 691893, 699139, 699371, 699409, 701191,
701870, 701972, 707364, 708762, 714087, 714747, 717358, 718861, 719054, 720120,
722865, 724583, 726135, 733351, 738853, 741803, 750916, 752300, 752569, 755114,
755829, 756610, 759058, 765683, 768134, 771917, 772901, 778006, 778991, 781706,
783501, 784335, 785982, 791231, 792516, 793513, 794235, 799261, 799621, 800315,
802128, 808838, 809723, 815805, 816665, 819565, 822296, 830114, 833614, 838582,
838748, 840023, 840510, 851824, 855328, 856970, 859883, 860809, 867868, 872647,
872677, 875320, 875590, 880724, 880823, 885701, 886931, 891122, 891567, 892574,
894735, 897406, 900539, 901241, 901338, 902204, 909704, 913761, 914217, 914647,
917432, 917868, 921460, 930209, 930752, 933120, 933179, 935308, 935794, 936736,
937849, 938937, 940339, 940849, 941745, 947651, 949604, 950336, 950508, 951958,
952979, 954581, 955110, 956763, 957330, 957785, 961066, 965404, 966406, 967053,
968512, 968974, 969875, 973406, 977153, 977564, 979538, 980626, 981931, 990294,
993973, 1000252, 1000457, 1003315, 1003558, 1008941, 1015563, 1017327, 1017601,
1018240, 1024084, 1027180, 1027549, 1028530, 1030827, 1031593, 1034508, 1034533,
1041749, 1049138, 1049454, 1049659, 1051896, 1053655, 1054161, 1056738, 1065428,
1067433, 1068797, 1069191, 1069473, 1074009, 1074325, 1075502, 1082602, 1090224,
1091198, 1091411, 1092121, 1096619, 1098246, 1098802, 1100407, 1101650, 1103957,
1106064, 1110496, 1111609, 1112172, 1113198, 1113429, 1116676, 1120159, 1120742,
1122510, 1124086, 1126287, 1126696, 1128337, 1128631, 1129278, 1135597, 1137231,
1137516, 1140655, 1141338, 1144151, 1147138, 1147470, 1149223, 1158586, 1158608,
1159035, 1161551]
prime: 9999999967
- ksize: 31
md5sum: ef6af6de59b4597c9b165ec2656e24c0
mins: [8853152462442, 11775591917251, 12417600583424, 12967160839321, 19589450030481,
34983894848302, 48118862848726, 57207601867680, 57446976927523, 60642658942400,
61809784834765, 63197104097404, 67909887124011, 68363862330572, 72111648732543,
75657499916948, 82106075459230, 90193385604476, 96283451828316, 97472500391918,
98909610579747, 100076791946175, 102542601297400, 112405767470749, 113476651959673,
114728608045843, 120267433175521, 144144379686602, 148310445650410, 149737236081556,
152700135234763, 155556334925546, 155589709048562, 156397613450177, 156941044766271,
159147629196289, 160884190361349, 161969661557875, 162139892469887, 176104250354528,
176714151907861, 188705192084388, 195432284495000, 197498626415785, 211517203463743,
214992852254351, 215602969608031, 220790944039493, 221076705695441, 222952666131323,
228378373712442, 232473626153189, 235141311625328, 240073308223937, 242043011006709,
242134299105299, 250261812036636, 262358581258115, 263196517732168, 264629638530085,
274134435305095, 274321918561710, 280192206550474, 286997145915575, 287341299552649,
289064432522067, 291806704498796, 292988224696069, 298809185016211, 311490436812266,
313104063147262, 314575721631000, 320208007315855, 328778404547558, 334939088248808,
341615182351045, 349365722128809, 352162329210940, 354424915037420, 362189431462702,
366425116669600, 367195735768108, 376675129382544, 378690046805296, 392002689831704,
392044972441779, 393618667065896, 401540316432273, 404689320644822, 404708739623752,
410856551296398, 413259180406142, 418719823250700, 418868367497311, 423063594343222,
432096708521835, 435462152624921, 439222407058580, 440561560011971, 442292575188614,
442329291101294, 445276211219462, 450176589119166, 457785382339919, 461273381032519,
469871530035224, 480962572656185, 483468792099374, 498538954225145, 502229931687011,
508525208571146, 513299877457429, 515799076756253, 522152696311038, 525525184300289,
541027675019258, 543454044275987, 552289743417147, 555066672768888, 555327750427016,
562696605553932, 571715215597745, 577070722544659, 577129236923501, 582200404644997,
591483928713839, 596825257239623, 604956298302191, 608781241115056, 610354804700837,
612022465469059, 615812225590661, 616378905707305, 619937994718560, 624696472103905,
625465762759606, 625921332810831, 630234004508047, 632456803093102, 636117060288320,
637541617102427, 638681538670763, 642450094125292, 646583433702987, 647696848953522,
653068250395958, 666264553362950, 674311614198345, 679258556106702, 679707585199976,
689801076118701, 697494340404181, 702148862587387, 733337395893707, 736732901639806,
737728391232082, 749181614415751, 750857851598500, 751025428904136, 756207462811976,
765084387587549, 776941566992858, 778169780925306, 778698099665846, 780549691245000,
788033515936398, 799027725812538, 806777586987860, 808232085453491, 809771553633149,
810330324822321, 812126816497271, 825387389835099, 831115512918379, 836787333798910,
838712387634693, 840917183449026, 841328959524851, 843495800259236, 845869393362264,
848740831801476, 851534969810023, 860537584385899, 864291729736208, 870048585208153,
873065170980017, 876284233360417, 877054468099791, 879610648015126, 882291590273566,
884697429017092, 887010985805174, 895269314017575, 895360747568935, 897542404955202,
898337544126545, 906146069706365, 907313948187841, 911852069925180, 915030345183369,
918173872471483, 921355896725081, 924756328836529, 929099681919775, 937687222044544,
938119503792782, 941174003265523, 941420189530303, 943497469993902, 943845726218898,
961207953077175, 961507666137690, 963655380304438, 967868725850463, 968573314040677,
968653134952241, 974750340584221, 977764108089981, 983807061259698, 987182565998638,
991927486865322, 1002068691223924, 1003093946461967, 1008717745609251, 1015348206486665,
1015358013885971, 1024056356795608, 1027033515099275, 1055943141733517, 1057718391414900,
1080413081951971, 1082011252969129, 1082114640347926, 1082900685213301, 1087141998563293,
1087788865252043, 1090014591123945, 1091355789943515, 1102591022610841, 1107493253013972,
1113020927593887, 1114286473635311, 1114731814176682, 1116711032598848, 1120980369745057,
1127877146102947, 1139897571939404, 1147629434943279, 1156433988473103, 1158713789826140,
1171021167947888, 1172945209658200, 1177789786719785, 1178399014982704, 1180115912946095,
1181426250087088, 1187055308766020, 1187323460327415, 1200566742957476, 1201077199038449,
1202293639544886, 1204164365648306, 1209014154947390, 1210820605102682, 1225939980736307,
1232796329864290, 1238432991558777, 1243912071403209, 1256741119952002, 1266242634682671,
1272564899548519, 1272934314027355, 1273762991023587, 1281342256654090, 1286759627494254,
1288740123242341, 1289539736544217, 1289646624189164, 1298123294670307, 1299770043819826,
1307074800072484, 1313000445148914, 1318146878824966, 1322437858337679, 1325512962300983,
1335417540057828, 1336420300255756, 1345253129564313, 1353503778433906, 1355212395615075,
1370411669336969, 1372430558463976, 1376644738418846, 1378890737693711, 1380287954765387,
1383088673189344, 1383902359210606, 1391279518212604, 1392778236271657, 1398114954164995,
1412822455812628, 1412836303551125, 1432720206065240, 1437135568895249, 1439155620648500,
1439291856330876, 1440720680002412, 1456216222311549, 1470074821120818, 1470894207085167,
1472635543995669, 1474206748906739, 1477500624826407, 1484645790766361, 1488577459741515,
1490817281855977, 1491924775078228, 1494951677077918, 1500230366671648, 1510457426145297,
1512825704306781, 1514442442765018, 1524958186966281, 1529522374062910, 1531080576176256,
1534841459951861, 1535219576033767, 1547987227697359, 1550674084709067, 1556445613969393,
1557581432463360, 1560149692285792, 1572235305342088, 1574523571663033, 1593094968099856,
1595071494936747, 1598874242348920, 1600493724479834, 1611649395848623, 1620988216115968,
1631401922447651, 1635253863342942, 1641972079215917, 1646305586283374, 1650854470319598,
1653436450021796, 1656069814488147, 1661955036771240, 1672201706680731, 1679302488247241,
1682515188042229, 1684995737274676, 1691136784104068, 1697998423913563, 1698816647552883,
1699343438182601, 1704632239566962, 1708136822409554, 1709252467611850, 1713705149272104,
1717265775389122, 1724419261894690, 1724542247468232, 1728548602526642, 1729550315346852,
1732356231954445, 1743575475260654, 1744700062884935, 1748741124666940, 1753569848999770,
1757161493147858, 1758005449880098, 1766947235667036, 1767526290774482, 1775972678638669,
1781073604216279, 1787559468999674, 1794569000385375, 1799544325515572, 1811169987979406,
1812339015611479, 1814051782132309, 1821277089723688, 1823030760758743, 1827966507835437,
1834183625092013, 1835846251986541, 1837147132670102, 1837159999178375, 1838134893935230,
1839204452121780, 1842325556847097, 1853233000451431, 1856346818607207, 1860202112015236,
1863424488624035, 1864568338007110, 1866406842974011, 1870976081988279, 1880771867734585,
1885679145138241, 1890473361125792, 1900791559865743, 1908108807852742, 1910511613212118,
1915188108948434, 1915493594536102, 1925022998772857, 1934762644223774, 1938511619710599,
1945531722988108, 1950724359693273, 1953364607620763, 1956612376434053, 1958261737393590,
1959705324042116, 1967315309164734, 1969034970012525, 1969703900731002, 1969711704594391,
1970819406052939, 1971614175982941, 1981282204923626, 1983455555884562, 1984168746519753,
1994911429273122, 1997149825699304, 2000469733473504, 2000701564926084, 2002692390140850,
2004646328239639, 2005149408133498, 2009085938592807, 2010430731035589, 2010981266060057,
2013131594142031, 2040792684443871, 2041427220982982, 2046477851523626, 2061995478737992,
2071258497028838, 2077793861625484, 2078247912627319, 2079688863898573, 2088557613972045,
2104002345468121, 2104592051219585, 2110718306252330, 2114313826290791, 2124066543582143,
2128298411067035, 2133445734856852, 2136661383228980, 2136891095880283, 2138210529062694,
2140631883115365, 2141156628686768, 2145434386685604, 2157107018324283, 2162507308838788,
2164847582292928, 2168003232689941, 2170500215752708, 2170592446407151, 2180307381047618,
2181563953065047, 2189935163155857, 2196960500853756, 2198236592308613, 2204089745276899,
2204877639698476, 2209940360319297, 2218259608852079, 2222619308644935, 2227343641582318,
2228295162112288, 2237332905578188, 2239927481824795, 2241659746281012, 2247313845829978,
2248984236489249, 2253898341197387, 2255167049423984, 2257098316759487, 2257918487307176,
2259338666351565, 2261184284346407, 2268879212723606, 2274444100955231, 2275646073596300,
2281311515985406, 2290878631046055, 2300108339385544, 2304698304611287, 2311365757183594,
2323107040191814, 2328308818284120, 2338862835563458, 2340222879080737, 2344645342857444]
num: 500
type: mrnaseq
version: '0.2'
version: 0.4
---

0 comments on commit b1aee48

Please sign in to comment.