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and used sourmash signature describe to describe one signature and saw this output:
== This is sourmash version 2.2.0. ==
== Please cite Brown and Irber (2016), doi:10.21105/joss.00027. ==
loaded 1 signatures total.
---
signature filename: MSM6J2M3_mgx.un
signature: MSM6J2M3_mgx
source file: inputs/mgx/MSM6J2M3_R2.fastq.gz
md5: 310e18dc950a60a84b280f7a18959af7
k=51 molecule=DNA num=0 scaled=2000 seed=42 track_abundance=1
size: 21618
signature license: CC0
The source file line made me nervous because it made me think that only one file was used to calculate the signature, but then I realized that the source file that is recorded is probably the last file that is given to compute. This is fine, but I think we should add it to the documentation.
The text was updated successfully, but these errors were encountered:
ctb
changed the title
Add documentation to sourmash signature describe for source file origin
Add documentation to sourmash signature describe for source file origin
Apr 23, 2021
To chime in on this issue, I spent a while being misled by this too: I thought I was using the --merge flag incorrectly. Would be nice to know/be warned that the source_file will get funky when using --merged sketches
I calculated signatures like this:
and used
sourmash signature describe
to describe one signature and saw this output:The
source file
line made me nervous because it made me think that only one file was used to calculate the signature, but then I realized that thesource file
that is recorded is probably the last file that is given tocompute
. This is fine, but I think we should add it to the documentation.The text was updated successfully, but these errors were encountered: