Genome sequencing, assembly, and annotation of Reference panel of Aspergillus fumigatus strains.

Collaborative work in the http://lab.stajich.org and https://geiselmed.dartmouth.edu/cramer/ Laboratories

Assembly and Annotation of A. fumigatus ref strains

• Nanopore assembly
  • Canu, Flye, NECAT, NextDenovo comparison (consider shasta, wtdbg2)
  • Polishing with Pilon
  • Stats from genome assemblies for telomere and BUSCO completeness