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orchestration for singularity containers (under development)
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Multi-Repository Data Submission using ISA-JSON
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FAIR Genomes semantic metadata model. The core is a YAML file, which is transformed into all other desired output formats.
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Solid Technical Reports
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Documentation for data submissions from life science research in public repositories
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Repository for the EU-funded HORIZON-ZEN project
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FAIR IN A BOX
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This is a stand-alone OAI-PMH data provider. It serves records in any metadata format from directories of XML files using the directory name as metadata prefix, the filename as identifier and the filemtime as datestamp. 0-byte files are considered deleted records and handled accordingly. Resumption tokens are managed using files.
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Repository for the Distributed Analysis
2 StarredNov 13, 2023 -
MOLGENIS EMX2, the latest version of the MOLGENIS data platform.
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Synthetic Patient Population Simulator
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DBpedia Archivo - Augmented Ontology Archive powered by Databus
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The Semanticscience Integrated Ontology (SIO) provides a simple, integrated ontology of types and relations for rich description of objects, processes and their attributes.
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Library for building GraphQL queries from fragments. Goes nicely with React.
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Starting a new JS app? Build, test and run advanced apps with kyt 🔥
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Collation of metadata examples and notes for the project
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Multithreaded, gzip-compatible compression and decompression, available as a platform-independent Java library and command-line utilities.
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Omnipy is a high level Python library for type-driven data wrangling and scalable workflow orchestration (under development)
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Inference code for Llama models
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Etherpad: A modern really-real-time collaborative document editor.
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Converts templated Excel files to SKOS RDF
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A javascript library to run SQLite on the web.
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A repository that contains best practices for genomics wastewater surveillance
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A TACA plugin adding functionality relevant for the ngi_pipeline
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openEHR templates & archetypes + termonology/ontology for experiments in "Skalbara informatiklösningar" (Scalable solutions for informatics) a subproject https://genomicmedicine.se/
1 StarredNov 4, 2022 -
Metadata schema for the German Human Genome-Phenome Archive (GHGA)
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Metadata model and schemas for the EJP virtual platform
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This repository contains implementation artifacts related to CDE-semantic-model