Flask MDT App

Flask app for project in Clinical Computing rotation of STP.

Status

This was developed as a project for a rotation and is a functional flask app. The design folder contains a list of extra features and requirements, but I have since left the department and they have continued development.

MDT app overview

This projects uses the flask microframework and this section gives a quick rundown of what each part of the app is used for. For each module, the init file gives a quick description of the module's purpose and function.

• config.py - stores settings for testing, development and production.
  • Default is development but os environment variable FLASK_CONFIG sets the configuration
• manage.py can be for command line
  • python manage.py runserver - run server
  • python manage.py db - run alembic commands
  • python shell - run command line python with the mdt_app
• secret_info.py - all information that should be no loaded into a public repo
• design folder contains some basic requirement and design choices information
• migrations folder - alembic migrations of database
• tests folder contains all tests (pytest)
• venv folder may be present, contains python virtual environment
• mdt_app module (this module)
  • Contains modules for different bluebrints (admin, auth and main)
  • static folder contains all javascript and css
  • templates folder contains all Jinja2 templates for site
  • models.py - data models
  • decorators.py - decorator for admin_required for access to view