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Popular repositories

  1. extract-transcript-regions

    For biological deep sequencing data. Decompose a UCSC knownGenes/Ensembl GTF file into transcript regions (i.e. exons, introns, UTRs and CDS).

    Python 9 6

  2. homebrew-science

    Forked from Homebrew/homebrew-science

    Scientific formulae for the Homebrew package manager


  3. competitive-binding-simulator

    A simple simulator for biochemical competitive binding experiments, e.g. fluorescence polarization.


  4. tripseq-analysis

    Analysis tools for TrIP-seq data.


  5. free

    An analog of the *NIX free utility for OSX. Monitor memory usage.


  6. transcriptome-properties

    For bioinformatic analysis of RNA transcripts. Calculate various properties of an input transcriptome such as length, GC content, and number of exons per transcript or transcript region.

    Python 1

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