feat: describe CPM_normalized_values.txt file

stjudecloud · Mar 30, 2021 · 9b8d0c7 · 9b8d0c7
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commit 9b8d0c7
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/docs/genomics-platform/workflow-guides/warden/index.md b/docs/genomics-platform/workflow-guides/warden/index.md
@@ -274,7 +274,7 @@ In addition to viewing the MA and volcano plots through the visualization tool,
 
 #### Differential expression results
 
-Other useful differential expression results will be created. This includes tabular output from the differential expression analysis. For each comparison with three or more samples per condition, `results.limma.<contrast>.txt` will be produced. `results.simple_DE.<*contrast>.txt` will be created for all comparisons, regardless of sample size. These can be found in the `DIFFERENTIAL_EXPRESSION/` directory.
+Other useful differential expression results will be created. This includes tabular output from the differential expression analysis. For each comparison with three or more samples per condition, `results.limma.<contrast>.txt` will be produced. `results.simple_DE.<*contrast>.txt` will be created for all comparisons, regardless of sample size. You can find a counts matrix normalized by Counts Per Million (CPM) in the file `CPM_normalized_values.txt`. All of these will be located in the `DIFFERENTIAL_EXPRESSION/` directory.
 
 #### GSEA.input.<*contrast*>.txt and GSEA.tStat.<*contrast*>.txt