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fix: explicitly sort by RG ID. This matches the sorting from bam-to-f… #64

fix: explicitly sort by RG ID. This matches the sorting from bam-to-f…

fix: explicitly sort by RG ID. This matches the sorting from bam-to-f… #64

Workflow file for this run

name: Workflows Sprocket Lint
on: [push]
jobs:
sprocket_lint:
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v2
- name: Set up Rust
uses: actions-rust-lang/setup-rust-toolchain@v1
with:
toolchain: nightly
- name: Install sprocket
run: |
cargo install sprocket
- name: Run sprocket
run: |
EXITCODE=0
echo "Checking WDL files using \`sprocket lint\`."
shopt -s extglob
files=$(find ./!(template) -name '*.wdl')
for file in $files; do
echo " [***] $file [***]"
sprocket lint "$file"
EXITCODE=$(($? || EXITCODE))
done
exit $EXITCODE