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@SysBioInra

SysBioINRAe

Systems Biology team of the lab MaIAGE at Inrae, France

Popular repositories

  1. RBApy RBApy Public

    Python package for creating, calibrating and simulating RBA models

    Python 11 10

  2. Bacterial-RBA-models Bacterial-RBA-models Public

    RBA models created by RBApy

    Python 4 4

  3. rbatools rbatools Public

    Programming interface to resource allocation modelling with the Resource Balance Analysis (RBA) method. This is version 1.0.3

    Python 2 2

  4. bipsim bipsim Public

    Gillespie-based simulator of biochemical processes

    C++ 1

  5. SysOnto SysOnto Public

    Systemic ontologies

  6. Reconstruction-of-censored-trajectories Reconstruction-of-censored-trajectories Public

    We consider particles trajectories following birth and death processes as well as Browian motion with drift. These trajectories are observed on a subregion of the region where they lye. We aim to r…

    1

Repositories

Showing 6 of 6 repositories
  • rbatools Public

    Programming interface to resource allocation modelling with the Resource Balance Analysis (RBA) method. This is version 1.0.3

    Python 2 GPL-3.0 2 0 0 Updated Jun 7, 2023
  • RBApy Public

    Python package for creating, calibrating and simulating RBA models

    Python 11 GPL-3.0 10 11 0 Updated Jun 5, 2023
  • Bacterial-RBA-models Public

    RBA models created by RBApy

    Python 4 4 0 0 Updated Mar 7, 2023
  • bipsim Public

    Gillespie-based simulator of biochemical processes

    C++ 1 GPL-3.0 0 0 0 Updated Apr 18, 2021
  • Reconstruction-of-censored-trajectories Public

    We consider particles trajectories following birth and death processes as well as Browian motion with drift. These trajectories are observed on a subregion of the region where they lye. We aim to recognize if some of tracklets observed could connected through the unobserved region.

    0 1 0 0 Updated Jul 8, 2020
  • SysOnto Public

    Systemic ontologies

    0 0 0 0 Updated Jun 26, 2020

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