Advice needed. Pooled population data.

[d00bin]

Dear Zachary,

I would like to identify genes that are under selection in a particular species across multiple populations.
Most of the data I have comes from RNAseq projects.
What kind of statistics would you recommend to use in this case? Or should I just stick with Fst scans?

[szpiech]

Hello, I think for pooled data you're pretty much stuck with Fst, or at least none the statistics in selscan would be appropriate.

…

-Zachary

On Tue, Mar 14, 2023 at 11:18 AM d00bin ***@***.***> wrote: Dear Zachary, I would like to identify genes that are under selection in a particular species across multiple populations. Most of the data I have comes from RNAseq projects. What kind of statistics would you recommend to use in this case? Or should I just stick with Fst scans? — Reply to this email directly, view it on GitHub <#93>, or unsubscribe <https://github.com/notifications/unsubscribe-auth/ABAKRQUTGEQUEJ4LN5PFNODW4CD4RANCNFSM6AAAAAAV2SZ2WY> . You are receiving this because you are subscribed to this thread.Message ID: ***@***.***>

[d00bin]

Thanks for a quick reply!