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examples
examples
 
 
files_for_examples
files_for_examples
 
 
modules
modules
 
 
plugins
plugins
 
 
.gitignore
.gitignore
 
 
Draw_Protein_Dimensions.py
Draw_Protein_Dimensions.py
 
 
README.md
README.md
 
 
_summarize.py
_summarize.py
 
 
aKMT_Lys_pred.py
aKMT_Lys_pred.py
 
 
aaindex.py
aaindex.py
 
 
anglebetweenhelices.py
anglebetweenhelices.py
 
 
annotate_v.py
annotate_v.py
 
 
b2transparency.py
b2transparency.py
 
 
bbPlane.py
bbPlane.py
 
 
cb_colors.py
cb_colors.py
 
 
ccp4_contact.py
ccp4_contact.py
 
 
ccp4_ncont.py
ccp4_ncont.py
 
 
ccp4_pisa.py
ccp4_pisa.py
 
 
center_of_mass.py
center_of_mass.py
 
 
centroid.py
centroid.py
 
 
cgo_arrow.py
cgo_arrow.py
 
 
cgo_grid.py
cgo_grid.py
 
 
color_by_conservation.py
color_by_conservation.py
 
 
colorblindfriendly.py
colorblindfriendly.py
 
 
colorbydisplacement.py
colorbydisplacement.py
 
 
colorbyrmsd.py
colorbyrmsd.py
 
 
cubes.py
cubes.py
 
 
cyspka.py
cyspka.py
 
 
displacementmap.py
displacementmap.py
 
 
distancetoatom.py
distancetoatom.py
 
 
draw_rotation_axis.py
draw_rotation_axis.py
 
 
drawgridbox.py
drawgridbox.py
 
 
dssr_block.py
dssr_block.py
 
 
dynamic_mesh.py
dynamic_mesh.py
 
 
elbow_angle.py
elbow_angle.py
 
 
ex.py
ex.py
 
 
extra_fit.py
extra_fit.py
 
 
findSurfaceCharge.py
findSurfaceCharge.py
 
 
findSurfaceResidues.py
findSurfaceResidues.py
 
 
findseq.py
findseq.py
 
 
flatten_obj.py
flatten_obj.py
 
 
focal_blur.py
focal_blur.py
 
 
format_bonds.py
format_bonds.py
 
 
forster_distance_calculator.py
forster_distance_calculator.py
 
 
frame_slider.py
frame_slider.py
 
 
get_colors.py
get_colors.py
 
 
get_raw_distances.py
get_raw_distances.py
 
 
grepset.py
grepset.py
 
 
gridbox.py
gridbox.py
 
 
hbplus.py
hbplus.py
 
 
inertia_tensor.py
inertia_tensor.py
 
 
isoslider.py
isoslider.py
 
 
load_img_stack.py
load_img_stack.py
 
 
load_nrrd.py
load_nrrd.py
 
 
modevectors.py
modevectors.py
 
 
movie_color_fade.py
movie_color_fade.py
 
 
movie_fade.py
movie_fade.py
 
 
nmr_cnstr.py
nmr_cnstr.py
 
 
perp_maker.py
perp_maker.py
 
 
plane.py
plane.py
 
 
plot_noe.py
plot_noe.py
 
 
poseview.py
poseview.py
 
 
propka.py
propka.py
 
 
pymol2glmol.py
pymol2glmol.py
 
 
pymolscriptrepo.py
pymolscriptrepo.py
 
 
quickdisplays.py
quickdisplays.py
 
 
removealt.py
removealt.py
 
 
renumber.py
renumber.py
 
 
rotkit.py
rotkit.py
 
 
save_mopac.py
save_mopac.py
 
 
save_pdb_with_anisou.py
save_pdb_with_anisou.py
 
 
save_settings.py
save_settings.py
 
 
select_sites.py
select_sites.py
 
 
show_bumps.py
show_bumps.py
 
 
show_ligand_interactions.py
show_ligand_interactions.py
 
 
spectrum_states.py
spectrum_states.py
 
 
spectrumany.py
spectrumany.py
 
 
spectrumbar.py
spectrumbar.py
 
 
stereo_ray.py
stereo_ray.py
 
 
tmalign.py
tmalign.py
 
 
togroup.py
togroup.py
 
 
tox.ini
tox.ini
 
 
transformations.py
transformations.py
 
 
uniprot_features.py
uniprot_features.py
 
 
viol_noes.py
viol_noes.py
 
 
wfmesh.py
wfmesh.py
 
 

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PyMOL Script Repository

This repository hosts most of the scripts and (single file) plugins from the PyMOL Wiki. If you have a new script or plugin consider place it here. There is a Git intro page for new contributors.

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Collected scripts for Pymol

www.pymolwiki.org/index.php/Git_intro

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  • Python 59.9%
  • C 15.9%
  • HTML 10.7%
  • C++ 2.9%
  • Shell 2.6%
  • Tcl 1.7%
  • Other 6.3%