Annad (#290)

* renamed project to annad

* removed legacy spec

* updated vendor deps

* updated glide files

.github/CONTRIBUTING.md

@@ -21,8 +21,8 @@ done via the Github web interface when merging a PR.
 ### docs
 Pull requests are only accepted and merged when there is proper documentation.
 
-- Conceptual documentation needs to be provided here: https://github.com/xh3b4sd/anna/tree/master/doc/concept.
-- Process documentation needs to be provided here: https://github.com/xh3b4sd/anna/tree/master/doc/diary.
+- Conceptual documentation needs to be provided here: https://github.com/the-anna-project/annad/tree/master/doc/concept.
+- Process documentation needs to be provided here: https://github.com/the-anna-project/annad/tree/master/doc/diary.
 - Code documentation needs to be provided within the code: http://blog.golang.org/godoc-documenting-go-code.
 
 ### tests
@@ -34,6 +34,6 @@ tests.
 
 ### branches
 When collaborating and creating branches within the core repository
-https://github.com/xh3b4sd/anna branches should be deleted ones they are merged.
+https://github.com/the-anna-project/annad branches should be deleted ones they are merged.
 This prevents loosing the overview and keeps the repository in a clean state
 branch wise.

.github/PULL_REQUEST_TEMPLATE.md

@@ -8,7 +8,7 @@ https://github.com/blog/1506-closing-issues-via-pull-requests for more
 information.
 
 ### checklist
-- [ ] Make sure you read and understood the [CONTRIBUTING.md](https://github.com/xh3b4sd/anna/blob/master/.github/CONTRIBUTING.md).
+- [ ] Make sure you read and understood the [CONTRIBUTING.md](https://github.com/the-anna-project/annad/blob/master/.github/CONTRIBUTING.md).
 - [ ] Make sure you applied sufficient labels, milestone and assignee.
 - [ ] Make sure all TODOs are addressed.
 - [ ] Make sure there is sufficient documentation.

README.md

@@ -1,8 +1,9 @@
-[![maturity](https://img.shields.io/badge/status-alpha-red.svg)](https://github.com/xh3b4sd/anna) [![build status](https://travis-ci.org/xh3b4sd/anna.svg?branch=master)](https://travis-ci.org/xh3b4sd/anna) [![code coverage](https://codecov.io/github/xh3b4sd/anna/coverage.svg?branch=master)](https://codecov.io/github/xh3b4sd/anna?branch=master) [![Go Report Card](https://goreportcard.com/badge/github.com/xh3b4sd/anna)](https://goreportcard.com/report/github.com/xh3b4sd/anna) [![motivation](https://img.shields.io/badge/made%20with-%E2%99%A1-ff69b4.svg)](https://github.com/xh3b4sd/anna) [![GoDoc](https://godoc.org/github.com/xh3b4sd/anna?status.svg)](http://godoc.org/github.com/xh3b4sd/anna)
+[![maturity](https://img.shields.io/badge/status-alpha-red.svg)](https://github.com/the-anna-project/annad) [![build status](https://travis-ci.org/the-anna-project/annad.svg?branch=master)](https://travis-ci.org/the-anna-project/annad) [![code coverage](https://codecov.io/gh/the-anna-project/annad/coverage.svg?branch=master)](https://codecov.io/gh/the-anna-project/annad?branch=master) [![Go Report Card](https://goreportcard.com/badge/github.com/the-anna-project/annad)](https://goreportcard.com/report/github.com/the-anna-project/annad) [![motivation](https://img.shields.io/badge/made%20with-%E2%99%A1-ff69b4.svg)](https://github.com/the-anna-project/annad) [![GoDoc](https://godoc.org/github.com/the-anna-project/annad?status.svg)](http://godoc.org/github.com/the-anna-project/annad)
 
-# anna
-Anna, Artificial Neural Network Aspiration, aims to be self-learning and
-self-improving software.
+# annad
+The annad package implements a command line tool to run the neural network of
+the anna project. Anna, Artificial Neural Network Aspiration, aims to be
+self-learning and self-improving software.
 
 # abstract
 > AI is the last invention humanity will ever need to make.
@@ -33,7 +34,7 @@ way.
 # documentation
 All documentation is done using markdown file within the [doc/](doc) directory.
 Code documentation can also be found at
-[godoc](https://godoc.org/github.com/xh3b4sd/anna).
+[godoc](https://godoc.org/github.com/the-anna-project/annad).
 
 - [api](doc/api)
 - [concept](doc/concept)

command/boot/command.go

@@ -7,8 +7,8 @@ import (
 
 	"github.com/spf13/cobra"
 
+	"github.com/the-anna-project/annad/object/config"
 	servicespec "github.com/the-anna-project/spec/service"
-	"github.com/xh3b4sd/anna/object/config"
 )
 
 // New creates a new boot command.

command/boot/service_collection.go

@@ -6,6 +6,18 @@ import (
 	"github.com/cenk/backoff"
 	kitlog "github.com/go-kit/kit/log"
 
+	"github.com/the-anna-project/annad/service/activator"
+	"github.com/the-anna-project/annad/service/connection"
+	"github.com/the-anna-project/annad/service/endpoint"
+	"github.com/the-anna-project/annad/service/endpoint/metric"
+	"github.com/the-anna-project/annad/service/endpoint/text"
+	"github.com/the-anna-project/annad/service/feature"
+	"github.com/the-anna-project/annad/service/forwarder"
+	"github.com/the-anna-project/annad/service/network"
+	"github.com/the-anna-project/annad/service/storage"
+	memorystorage "github.com/the-anna-project/annad/service/storage/memory"
+	"github.com/the-anna-project/annad/service/storage/redis"
+	"github.com/the-anna-project/annad/service/tracker"
 	"github.com/the-anna-project/collection"
 	memoryfs "github.com/the-anna-project/fs/memory"
 	"github.com/the-anna-project/id"
@@ -19,18 +31,6 @@ import (
 	"github.com/the-anna-project/random"
 	objectspec "github.com/the-anna-project/spec/object"
 	servicespec "github.com/the-anna-project/spec/service"
-	"github.com/xh3b4sd/anna/service/activator"
-	"github.com/xh3b4sd/anna/service/connection"
-	"github.com/xh3b4sd/anna/service/endpoint"
-	"github.com/xh3b4sd/anna/service/endpoint/metric"
-	"github.com/xh3b4sd/anna/service/endpoint/text"
-	"github.com/xh3b4sd/anna/service/feature"
-	"github.com/xh3b4sd/anna/service/forwarder"
-	"github.com/xh3b4sd/anna/service/network"
-	"github.com/xh3b4sd/anna/service/storage"
-	memorystorage "github.com/xh3b4sd/anna/service/storage/memory"
-	"github.com/xh3b4sd/anna/service/storage/redis"
-	"github.com/xh3b4sd/anna/service/tracker"
 )
 
 func (c *Command) newServiceCollection() servicespec.ServiceCollection {

command/command.go

@@ -3,8 +3,8 @@ package command
 import (
 	"github.com/spf13/cobra"
 
-	"github.com/xh3b4sd/anna/command/boot"
-	"github.com/xh3b4sd/anna/command/version"
+	"github.com/the-anna-project/annad/command/boot"
+	"github.com/the-anna-project/annad/command/version"
 )
 
 // New creates a new annad command.

doc/concept/clg.md

@@ -17,7 +17,7 @@ implementing some functionality.
 
 Random fact: currently Anna is capable of more than 130 CLG implementations.
 This number is expected to be raised even further. For now manually, later on
-automatically. See https://godoc.org/github.com/xh3b4sd/anna/spec#CLGIndex.
+automatically. See https://godoc.org/github.com/the-anna-project/annad/spec#CLGIndex.
 
 ### BI, basic information
 BI, Basic Information, represent fundamental information that must be known to

doc/concept/client.md

@@ -1,11 +1,11 @@
 # client
 Documentation about the client described here refers the go [client
-package](https://godoc.org/github.com/xh3b4sd/anna/client). This package
+package](https://godoc.org/github.com/the-anna-project/annad/client). This package
 provides a client implementation of Anna's API in [golang](https://golang.org),
 used to communicate with the [server](server.md). See also the godoc of [the
-server package](https://godoc.org/github.com/xh3b4sd/anna/server). The client
+server package](https://godoc.org/github.com/the-anna-project/annad/server). The client
 described here is used for instance in the
-[annactl package](https://godoc.org/github.com/xh3b4sd/anna/annactl). For more
+[annactl package](https://godoc.org/github.com/the-anna-project/annad/annactl). For more
 information on this one see [the annactl documentation](annactl.md). The
 current implementation of the client and the server makes use of
 https://github.com/go-kit/kit.

doc/concept/connection.md

@@ -76,7 +76,7 @@ within the connection space.
 
 1. *Bias* is some manually provided hint, intended to guide some CLG tree into a
    certain direction. Read more on this in this issue:
-   https://github.com/xh3b4sd/anna/issues/44.
+   https://github.com/the-anna-project/annad/issues/44.
 
 2. *Intuition* is some sort of vague feeling that points into a certain
    direction. Drawing distantly related connections across multiple levels can

doc/concept/data_flow.md

@@ -10,16 +10,16 @@ very left is described in which layer the shown data flow actually happens.
 
 - Entrypoint here is [annactl](annactl.md), the command line client.
   [input](input.md) is received from the user and transformed into a
-  [TextRequest](https://godoc.org/github.com/xh3b4sd/anna/object/networkresponse#TextRequest).
+  [TextRequest](https://godoc.org/github.com/the-anna-project/annad/object/networkresponse#TextRequest).
   This request object is provided to the [client](client.md).
 - The client is asked to execute some business logic with respect to the given
   TextRequest, which is transformed into a
-  [StreamTextRequest](https://godoc.org/github.com/xh3b4sd/anna/object/networkresponse#StreamTextRequest)
+  [StreamTextRequest](https://godoc.org/github.com/the-anna-project/annad/object/networkresponse#StreamTextRequest)
   and send to the [server](server.md).
 - The server receives the StreamTextRequest and transforms it back into a
   TextRequest. This is then forwarded to the [network](network.md).
 - The network takes the TextRequest, transforms it to a
-  [NetworkPayload](https://godoc.org/github.com/xh3b4sd/anna/spec#NetworkPayload).
+  [NetworkPayload](https://godoc.org/github.com/the-anna-project/annad/spec#NetworkPayload).
   [CLGs](clg.md) take over with by processing and dispatching further network
   payloads through the neural network. At some point the neural network decides
   to stop processing and returns the output as shown below until data is flown

doc/concept/distribution.md

@@ -2,7 +2,7 @@
 A distribution is a calculation object that describes the distribution of
 vectors within space. This vectors can be of arbitrary dimensions. That way
 characteristics of features and their location in space can be represented and
-alanysed. See https://godoc.org/github.com/xh3b4sd/anna/spec#Distribution for
+alanysed. See https://godoc.org/github.com/the-anna-project/annad/spec#Distribution for
 implementation details.
 
 ### balance system

doc/concept/instrumentation.md

@@ -4,7 +4,7 @@ Anna project we oriented on the [prometheus project](https://prometheus.io).
 Within the project's code we make use of the [prometheus client
 library](https://godoc.org/github.com/prometheus/client_golang/prometheus).
 This client is abstracted by the [instrumentation
-package](https://godoc.org/github.com/xh3b4sd/anna/instrumentation), which can
+package](https://godoc.org/github.com/the-anna-project/annad/instrumentation), which can
 be used to emit metrics to your likes. Note there is a memory implementation
 that does basically nothing. To actually emit metrics there need to be the
 configured prometheus implementation used. For graph visualization

doc/concept/logging.md

@@ -1,5 +1,5 @@
 # logging
 Logging is one important aspect to comprehend what is going on within a
 process. Check the code documentation for technical details on the logging
-implementation: https://godoc.org/github.com/xh3b4sd/anna/log. Further logging
+implementation: https://godoc.org/github.com/the-anna-project/annad/log. Further logging
 behaviour can be configured at runtime using [log control](control.md#log).

doc/concept/permutation_factory.md

@@ -52,5 +52,5 @@ This is how the Nth factory permutation looks like.
 
 See the following code documentation for more information.
 
-- https://godoc.org/github.com/xh3b4sd/anna/service/permutation
-- https://godoc.org/github.com/xh3b4sd/anna/spec#PermutationFactory
+- https://godoc.org/github.com/the-anna-project/annad/service/permutation
+- https://godoc.org/github.com/the-anna-project/annad/spec#PermutationFactory

doc/concept/server.md

@@ -1,6 +1,6 @@
 # server
 Documentation about the server described here refers to the [server
-package](https://godoc.org/github.com/xh3b4sd/anna/server) written in
+package](https://godoc.org/github.com/the-anna-project/annad/server) written in
 [golang](https://golang.org). The server provides Anna's API to execute her
 business logic from remote. The [client](client.md) may communicate with the
 server to ask for any kind of operation of Anna's [interface](interface.md) or

doc/development/cheat_sheet.md

@@ -66,7 +66,7 @@ $ go list -json ./service/random | jq .Imports
   "fmt",
   "github.com/cenk/backoff",
   "github.com/juju/errgo",
-  "github.com/xh3b4sd/anna/service/spec",
+  "github.com/the-anna-project/annad/service/spec",
   "io",
   "math/big",
   "time"

doc/development/guidelines.md

@@ -25,7 +25,7 @@ place. It is hard to come up with decent integration tests. Here we need to
 find ways to create integration tests that do not hurt, that are beautiful and
 in best case even fast. The last point is in most cases contradictionary.
 Anyway [make gotest](makefile.md#gotest) is your friend. Further code coverage
-is tracked at https://codecov.io/github/xh3b4sd/anna.
+is tracked at https://codecov.io/gh/the-anna-project/annad.
 
 ### data format
 Data formats depend on the use case. E.g. for simplicity of some network API,

doc/development/setup.md

@@ -10,7 +10,7 @@ export GOPATH=~/gopath
 
 The Anna project is then located here.
 ```
-~/gopath/src/github.com/xh3b4sd/anna    
+~/gopath/src/github.com/the-anna-project/annad    
 ```
 
 ### prerequisites

doc/diary/2016_01_11.md

@@ -9,6 +9,6 @@ I am quite familiar with it. It is a very nice language providing decent
 concurrency patterns. Thus the project setup was rather a pain since the
 concept of golangs workspaces is, lets say, suboptimal. A Makefile is required
 to ease development. Initial documentation was written. See
-[doc](https://github.com/xh3b4sd/anna/tree/78948e3d0da0077444c5434df59fe56d2014a606/doc).
+[doc](https://github.com/the-anna-project/annad/tree/78948e3d0da0077444c5434df59fe56d2014a606/doc).
 
 xh3b4sd

doc/diary/2016_01_18.md

@@ -13,6 +13,6 @@ gateways. Gateways? Read on!
 
 Interfaces were defined yesterday, but as always, the first shot is simply the
 first shot. See the [core concept
-documentation](https://github.com/xh3b4sd/anna/blob/b16ed18e115219a030a0e0b689ad75a71e54498f/doc/concept/core.md).
+documentation](https://github.com/the-anna-project/annad/blob/b16ed18e115219a030a0e0b689ad75a71e54498f/doc/concept/core.md).
 
 xh3b4sd

doc/diary/2016_01_24.md

@@ -24,10 +24,10 @@ it is super cool and can be used to decouple components.
 
 Meanwhile I was sick of the project structure. One weird thing was the strange
 URL for the public godoc. Because the source code was within the folder
-`github.com/xh3b4sd/anna`, the URL of the godoc was
-`https://godoc.org/github.com/xh3b4sd/anna/src/github.com/xh3b4sd/anna`. This
+`github.com/the-anna-project/annad`, the URL of the godoc was
+`https://godoc.org/github.com/the-anna-project/annad/src/github.com/the-anna-project/annad`. This
 sucked. Now, with some more magic within the `Makefile`, the source code is
 right in the project root directory as it should be, and the godoc URL is
-`https://godoc.org/github.com/xh3b4sd/anna` as expected.
+`https://godoc.org/github.com/the-anna-project/annad` as expected.
 
 xh3b4sd

doc/diary/2016_01_27.md

@@ -15,7 +15,7 @@ behaviours.
 
 Once some restructuring was done logging was able to be provided for all
 objects. Simple print statements are replaced by the injected logger. Check
-https://godoc.org/github.com/xh3b4sd/anna/log for more implementational
+https://godoc.org/github.com/the-anna-project/annad/log for more implementational
 details.
 
 xh3b4sd

doc/diary/2016_02_01.md

@@ -7,7 +7,7 @@ in all cases and the program had some unpredictable side effects. Something
 else was needed. The factory concept was cool though and I wanted to keep it. I
 realized there is already something that abstracts communication and decouples
 dependencies, the
-[gateway](https://github.com/xh3b4sd/anna/blob/43ecdc8c9ce05bb41c3f66bff4dde90a0552dc59/doc/concept/gateway.md)!
+[gateway](https://github.com/the-anna-project/annad/blob/43ecdc8c9ce05bb41c3f66bff4dde90a0552dc59/doc/concept/gateway.md)!
 So I removed the multi state concept. Made the code cleaner. Made the state
 concept work.
 
@@ -34,7 +34,7 @@ unmarshaled because interfaces describe functionality, not a structure. Go
 cannot know what structure to use when there is just a hint of a interface
 type. As soon as there is a real implementation of some interface, go can
 lookup the underlying structure and unmarshal bytes into it. To check how it
-works, see https://godoc.org/github.com/xh3b4sd/anna/state.
+works, see https://godoc.org/github.com/the-anna-project/annad/state.
 
 Finally backup and restore functionality was implemented. When Anna is doing
 things it creates state. On shutdown she dumps her state to the file system.

doc/diary/2016_02_10.md

@@ -13,7 +13,7 @@ use the logger.
 How does it now look like? The following shows the usage of a new logger. When
 logging messages the call to the logger takes log tags that are used to
 determine if the log messages should be printed under current log
-configurations. See https://godoc.org/github.com/xh3b4sd/anna/spec#Tags for
+configurations. See https://godoc.org/github.com/the-anna-project/annad/spec#Tags for
 explanations of the tags usage. So I opted for this.
 
 ```go

doc/diary/2016_03_07.md

@@ -5,7 +5,7 @@ looks like.
 
 There was the idea of the job network. I discarded it, thought again about it,
 and so on. Back and forth. Now there is a
-[scheduler](https://godoc.org/github.com/xh3b4sd/anna/scheduler) managing jobs.
+[scheduler](https://godoc.org/github.com/the-anna-project/annad/scheduler) managing jobs.
 This is used in the server middlewares, resulting in cleaner code there. Now
 when receiving input a job is configured and sends a signal to the core network
 over the text gateway. It is possible to provide the expected output along with
@@ -21,12 +21,12 @@ tests. Got the thing right. Great. There is a memory implementation. With this
 we can test the neural networks and everything will be good and shiny.
 
 I added the
-[goreportcard](https://goreportcard.com/report/github.com/xh3b4sd/anna) badge.
+[goreportcard](https://goreportcard.com/report/github.com/the-anna-project/annad) badge.
 There some things were visible that I just fixed. Lots of documentation stuff,
 misspelling, code cleanup.
 
 Testing is a big thing since the
-[codecov](https://codecov.io/github/xh3b4sd/anna) support and the [chrome
+[codecov](https://codecov.io/gh/the-anna-project/annad) support and the [chrome
 browser
 extension](https://chrome.google.com/webstore/detail/codecov-extension/keefkhehidemnokodkdkejapdgfjmijf).
 This is really fun. The numbers call to be optimized. Coverage is at about 80%.

doc/diary/2016_03_14.md

@@ -58,6 +58,6 @@ concepts differ, but the base lines are the same.
 Anyway, I thought about crazy things. Artificial minds. See the evaluation
 documents as follows.
 
-https://github.com/xh3b4sd/anna/pull/108/files#diff-4bbf5a7fa82a94b1b5acd521f6a108c4
+https://github.com/the-anna-project/annad/pull/108/files#diff-4bbf5a7fa82a94b1b5acd521f6a108c4
 
 xh3b4sd

doc/diary/2016_03_22.md

@@ -46,7 +46,7 @@ channel, some output is received on the other channels.
 
 This idea was now partially implemented as distribution object and instead of
 dealing with impulses a distribution represents a population of vectors. See
-https://godoc.org/github.com/xh3b4sd/anna/net/pat#NewDistribution. I started
+https://godoc.org/github.com/the-anna-project/annad/net/pat#NewDistribution. I started
 with this because the goal behind this is to have some feature detection for
 sequence analysis. More is yet to come.
 

doc/diary/2016_05_16.md

@@ -4,7 +4,7 @@ This is the 25th diary entry. One step closer to CLG profile creation.
 I managed to implement the CLG profile creation in the first iteration. This
 involved the setup of an environment in which Anna can be integrated. For now
 there is a local environment in this repository:
-https://github.com/xh3b4sd/anna.local. The name is quite cool because the
+https://github.com/the-anna-project/annad.local. The name is quite cool because the
 domain for the Anna project is https://anna.earth. The domain for the local
 environment is http://anna.local. The `anna.local` environment boots up a
 [Vagrant]() box using [Virtualbox]() provider and sets up necessary components