Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Compute initial states #404

Merged
merged 3 commits into from Oct 2, 2020
Merged

Compute initial states #404

merged 3 commits into from Oct 2, 2020

Conversation

michalk8
Copy link
Collaborator

@michalk8 michalk8 commented Oct 2, 2020

IMPORTANT: Please search among the Pull request before creating one.

Title

See below.

Types of changes

  • Bug fix (non-breaking change which fixes an issue)
  • Breaking change (fix or feature that would cause existing functionality to not work as expected)
  • New feature (non-breaking change which adds functionality)

Description

Update docs, change default for cr.tl.transiton_matrix add _compute_initial_states for GPCCA.

How has this been tested?

Yes, new tests for the new functions.

Closes

#401
#402
#403

@codecov
Copy link

codecov bot commented Oct 2, 2020

Codecov Report

Merging #404 into master will increase coverage by 0.06%.
The diff coverage is 80.00%.

Impacted file tree graph

@@            Coverage Diff             @@
##           master     #404      +/-   ##
==========================================
+ Coverage   80.07%   80.13%   +0.06%     
==========================================
  Files          49       49              
  Lines        6248     6267      +19     
==========================================
+ Hits         5003     5022      +19     
  Misses       1245     1245              
Impacted Files Coverage Δ
cellrank/tl/_transition_matrix.py 96.15% <ø> (+15.38%) ⬆️
cellrank/tl/_utils.py 82.54% <ø> (ø)
cellrank/ul/_docs.py 100.00% <ø> (ø)
cellrank/tl/estimators/_gppca.py 86.41% <80.00%> (-0.37%) ⬇️

Continue to review full report at Codecov.

Legend - Click here to learn more
Δ = absolute <relative> (impact), ø = not affected, ? = missing data
Powered by Codecov. Last update 548d103...7330001. Read the comment docs.

@michalk8 michalk8 merged commit 0f8de37 into master Oct 2, 2020
@michalk8 michalk8 deleted the compute_initial_states branch October 2, 2020 13:39
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

Successfully merging this pull request may close these issues.

None yet

1 participant