Theis Lab

Pinned

1. single-cell-tutorial Public

   Single cell current best practices tutorial case study for the paper:Luecken and Theis, "Current best practices in single-cell RNA-seq analysis: a tutorial"

   Jupyter Notebook 1k 386

2. scvelo Public

   RNA Velocity generalized through dynamical modeling

   Python 309 85

3. scarches Public

   Reference mapping for single-cell genomics

   Jupyter Notebook 249 46

4. single-cell-best-practices Public

   This project is work in progress! https://www.sc-best-practices.org

   Jupyter Notebook 238 24

5. cellrank Public

   CellRank for directed single-cell fate mapping

   Python 223 24

6. scib Public

   Benchmarking analysis of data integration tools

   Python 202 38