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  1. Single cell current best practices tutorial case study for the paper:Luecken and Theis, "Current best practices in single-cell RNA-seq analysis: a tutorial"

    Jupyter Notebook 1k 386

  2. scvelo Public

    RNA Velocity generalized through dynamical modeling

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  3. scarches Public

    Reference mapping for single-cell genomics

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  4. This project is work in progress!

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  5. cellrank Public

    CellRank for directed single-cell fate mapping

    Python 223 24

  6. scib Public

    Benchmarking analysis of data integration tools

    Python 202 38