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  1. Single cell current best practices tutorial case study for the paper:Luecken and Theis, "Current best practices in single-cell RNA-seq analysis: a tutorial"

    Jupyter Notebook 1.2k 419

  2. https://www.sc-best-practices.org

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  3. scvelo Public

    RNA Velocity generalized through dynamical modeling

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  4. scarches Public

    Reference mapping for single-cell genomics

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  5. cellrank Public

    CellRank: dynamics from multi-view single-cell data. See the docs:

    Python 256 33

  6. scib Public

    Benchmarking analysis of data integration tools

    Python 235 47

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