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Feature/update references #883

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54 changes: 54 additions & 0 deletions docs/source/references.bib
Expand Up @@ -471,3 +471,57 @@ @article{nowotschin:19
doi={10.1038/s41586-019-1127-1},
publisher={Nature Publishing Group}
}

@article{bergen:21,
title={RNA velocity—current challenges and future perspectives},
author={Bergen, Volker and Soldatov, Ruslan A and Kharchenko, Peter V and Theis, Fabian J},
journal={Molecular systems biology},
volume={17},
number={8},
pages={e10282},
year={2021}
}

@article{street:18,
title={Slingshot: cell lineage and pseudotime inference for single-cell transcriptomics},
author={Street, Kelly and Risso, Davide and Fletcher, Russell B and Das, Diya and Ngai, John and Yosef, Nir and Purdom, Elizabeth and Dudoit, Sandrine},
journal={BMC genomics},
volume={19},
number={1},
pages={1--16},
year={2018},
publisher={Springer}
}

@article{barile:21,
title={Coordinated changes in gene expression kinetics underlie both mouse and human erythroid maturation},
author={Barile, Melania and Imaz-Rosshandler, Ivan and Inzani, Isabella and Ghazanfar, Shila and Nichols, Jennifer and Marioni, John C and Guibentif, Carolina and G{\"o}ttgens, Berthold},
journal={Genome biology},
volume={22},
number={1},
pages={1--22},
year={2021},
publisher={BioMed Central}
}

@article{saelens:19,
title={A comparison of single-cell trajectory inference methods},
author={Saelens, Wouter and Cannoodt, Robrecht and Todorov, Helena and Saeys, Yvan},
journal={Nature biotechnology},
volume={37},
number={5},
pages={547--554},
year={2019},
publisher={Nature Publishing Group}
}

@article{haghverdi:15,
title={Diffusion maps for high-dimensional single-cell analysis of differentiation data},
author={Haghverdi, Laleh and Buettner, Florian and Theis, Fabian J},
journal={Bioinformatics},
volume={31},
number={18},
pages={2989--2998},
year={2015},
publisher={Oxford University Press}
}