update requirements (anndata 0.6.10, scanpy 1.3.1)

theislab · Sep 3, 2018 · 356999f · 356999f
1 parent 3578a70
commit 356999f
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Showing 2 changed files with 4 additions and 12 deletions.
diff --git a/requirements.txt b/requirements.txt
@@ -1,5 +1,5 @@
-git+https://github.com/theislab/anndata.git@db905235#egg=anndata
-git+https://github.com/theislab/scanpy.git@6c1daba#egg=scanpy
+scanpy~=1.3.1
+anndata~=0.6.10
 scikit-learn~=0.19.1
 matplotlib~=2.2
 loompy~=2.0.12

diff --git a/setup.py b/setup.py
@@ -3,16 +3,8 @@
 import numpy as np
 import versioneer
 
-HERE = Path(__file__).parent
-
-req_path = HERE / 'requirements.txt'
-if not req_path.is_file():
-    req_path = Path('scvelo.egg-info') / req_path
-requires = [
-    'scanpy' if ('theislab/scanpy' in r) else
-    'anndata' if ('theislab/anndata' in r) else r
-    for r in req_path.read_text().strip().split('\n')
-]
+req_path = Path('requirements.txt')
+requires = [r for r in req_path.read_text().strip().split('\n')]
 
 with open('README.rst') as readme_f:
     readme = readme_f.read()