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add VELOVI preprocess methods #1228

Draft

martinkim0 wants to merge 1 commit into theislab:main from martinkim0:velovi-preprocess

martinkim0 commented Mar 27, 2024

adds min_max_scale, filter_genes_r2, and velovi_preprocess_recipe to preprocessing.utils

to-do:

add tests
add get_permutation_scores


          initial transfer of velovi preprocess

0944a09

Author

martinkim0 commented Mar 27, 2024 •

edited

Hi @WeilerP, this is the PR based on our discussion in scverse/scvi-tools#2611. I wanted to get your thoughts on the following:

where should I add get_permutation_scores?
under what section in api.rst should velovi_preprocess_recipe be in?

martinkim0 marked this pull request as draft

March 27, 2024 21:26

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