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Installation Error Macosx #38

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thomaskern opened this issue Sep 24, 2013 · 1 comment
Closed

Installation Error Macosx #38

thomaskern opened this issue Sep 24, 2013 · 1 comment

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@thomaskern
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I get an error when trying to install dplyr via devtools. I also have the latest XCode (5.0)/Command Line Tools.

> install_github("dplyr")
Installing github repo(s) dplyr/master from hadley
Downloading dplyr.zip from https://github.com/hadley/dplyr/archive/master.zip
Installing package from /var/folders/tx/5yp3lm_j6_l076sm5htmvxxm0000gn/T//RtmpXuhEU8/dplyr.zip
Installing dplyr
'/Library/Frameworks/R.framework/Resources/bin/R' --vanilla CMD INSTALL  \
  '/private/var/folders/tx/5yp3lm_j6_l076sm5htmvxxm0000gn/T/RtmpXuhEU8/dplyr-master'  \
  --library='/Library/Frameworks/R.framework/Versions/3.0/Resources/library' --with-keep.source --install-tests 

* installing *source* package 'dplyr' ...
** libs
llvm-g++-4.2 -arch x86_64 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I"/Library/Frameworks/R.framework/Versions/3.0/Resources/library/Rcpp/include"   -fPIC  -mtune=core2 -g -O2  -c RcppExports.cpp -o RcppExports.o
llvm-g++-4.2 -arch x86_64 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I"/Library/Frameworks/R.framework/Versions/3.0/Resources/library/Rcpp/include"   -fPIC  -mtune=core2 -g -O2  -c split-indices.cpp -o split-indices.o
llvm-g++-4.2 -arch x86_64 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -L/usr/local/lib -o dplyr.so RcppExports.o split-indices.o /Library/Frameworks/R.framework/Versions/3.0/Resources/library/Rcpp/lib/libRcpp.a -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Library/Frameworks/R.framework/Versions/3.0/Resources/library/dplyr/libs
** R
** data
** inst
** tests
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded
Error in namespaceExport(ns, exports) : 
  undefined exports: join.tbl_sqlite
Error: loading failed
Execution halted
ERROR: loading failed
* removing '/Library/Frameworks/R.framework/Versions/3.0/Resources/library/dplyr'
Error: Command failed (1)

> sessionInfo()
R version 3.0.1 (2013-05-16)
Platform: x86_64-apple-darwin10.8.0 (64-bit)

locale:
[1] en_GB.UTF-8/en_GB.UTF-8/en_GB.UTF-8/C/en_GB.UTF-8/en_GB.UTF-8

attached base packages:
[1] stats     graphics  grDevices utils     datasets  methods   base     

other attached packages:
[1] devtools_1.3 vimcom_0.9-8

loaded via a namespace (and not attached):
[1] digest_0.6.3   evaluate_0.4.7 httr_0.2       memoise_0.1    parallel_3.0.1 RCurl_1.95-4.1 stringr_0.6.2 
[8] tools_3.0.1    whisker_0.3-2 
@thomaskern
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I cloned the master rep and used devtools' load_all(). worked.

> load_all()
Loading dplyr
Re-compiling dplyr
'/Library/Frameworks/R.framework/Resources/bin/R' --vanilla CMD INSTALL  \
  '/Users/thomaskern/Documents/programming/dplyr'  \
  --library='/var/folders/tx/5yp3lm_j6_l076sm5htmvxxm0000gn/T//RtmpUe3kBe' --no-R --no-data --no-help --no-demo  \
  --no-inst --no-docs --no-exec --no-multiarch --no-test-load --preclean 

* installing *source* package 'dplyr' ...
** libs
llvm-g++-4.2 -arch x86_64 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I"/Library/Frameworks/R.framework/Versions/3.0/Resources/library/Rcpp/include"  -UNDEBUG -Wall -pedantic -g -O0 -fPIC  -mtune=core2 -g -O2  -c RcppExports.cpp -o RcppExports.o
llvm-g++-4.2 -arch x86_64 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG  -I/usr/local/include -I"/Library/Frameworks/R.framework/Versions/3.0/Resources/library/Rcpp/include"  -UNDEBUG -Wall -pedantic -g -O0 -fPIC  -mtune=core2 -g -O2  -c split-indices.cpp -o split-indices.o
llvm-g++-4.2 -arch x86_64 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -L/usr/local/lib -o dplyr.so RcppExports.o split-indices.o /Library/Frameworks/R.framework/Versions/3.0/Resources/library/Rcpp/lib/libRcpp.a -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /private/var/folders/tx/5yp3lm_j6_l076sm5htmvxxm0000gn/T/RtmpUe3kBe/dplyr/libs
* DONE (dplyr)
Loading required namespace: assertthat
The dplyr API is currently rapidly evolving. I recommend that you don't rely on this for production, but feel free to explore. If you encounter a clear bug, please file a minimal reproducible example at https://github.com/hadley/dplyr/issues.For questions and other discussion, please use https://groups.google.com/group/manipulatr

@hadley hadley closed this as completed in 83aa2c7 Sep 25, 2013
krlmlr referenced this issue in krlmlr/dplyr Mar 2, 2016
@lock lock bot locked as resolved and limited conversation to collaborators Jun 11, 2018
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