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Nov 26, 2023 - R
whole-genome-sequencing
Here are 23 public repositories matching this topic...
Exploratory analysis for donor-recipient whole genome sequences
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Sep 30, 2018 - R
Investigate the role of mtDNA in the sex determination of freshwater mussels with doubly uniparental mitochondrial inheritance. Scripts for DESeq2, WGCNA, GSEA, AlphaFold/AlphaPulldown, and mt-sncRNA validation.
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Oct 2, 2023 - R
ABBA-BABA test conducted on Saccharomyces cerevisiae strains using whole-genome alignment.
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Dec 29, 2023 - R
Whole genome sequence analysis for donor-recipient pairs
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Apr 4, 2018 - R
An app for summarizing association analysis results of whole-genome/whole-exome sequencing (WGS/WES) studies in UK Biobank RAP
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Oct 3, 2023 - R
An app for summarizing association analysis results of whole-genome/whole-exome sequencing (WGS/WES) studies in UK Biobank RAP
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Oct 3, 2023 - R
An app for automatically functionally annotating the variants of whole-genome/whole-exome sequencing (WGS/WES) studies and integrating the functional annotations with the genotype data using FAVORannotator in UK Biobank RAP
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Feb 16, 2024 - R
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Jul 30, 2020 - R
R-package to analyse and quantify aberrations in DNA-sequencing data
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Jan 19, 2018 - R
Data and code repository for study aiming to understand ESBL carriage in Blantyre, Malawi
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Oct 30, 2023 - R
An R package for performing MultiSTAAR procedure in whole-genome sequencing studies
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Dec 11, 2023 - R
R tools to mine & craft somatic mutations from cancer genomes
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May 23, 2017 - R
Analysis and plotting functions for structural variant breakpoint data
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Dec 19, 2021 - R
An app for performing association analysis of whole-genome/whole-exome sequencing (WGS/WES) studies using STAARpipeline in UK Biobank RAP
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Apr 23, 2024 - R
GREMLIN: Genomic REarrangements by Machine Learning-based INspection
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Dec 12, 2022 - R
Accurate and robust inference of genetic ancestry from cancer-derived molecular data across genomic platforms
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Oct 13, 2023 - R
An R package for summarizing and visualizing association analysis results of whole-genome/whole-exome sequencing (WGS/WES) studies generated by STAARpipeline
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May 21, 2024 - R
A complete Snakemake pipeline for detecting allele specific expression in RNA-seq
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Jul 10, 2021 - R
The tutorial for performing association analysis of whole-genome/whole-exome sequencing (WGS/WES) studies using FAVORannotator, STAARpipeline and STAARpipelineSummary
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May 20, 2024 - R
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