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Updated README, added GHA, and test for assign_data
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fontikar committed Oct 9, 2023
1 parent 894b6bf commit c5e438c
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1 change: 1 addition & 0 deletions .Rbuildignore
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^doc$
^Meta$
^LICENSE\.md$
^\.github$
1 change: 1 addition & 0 deletions .github/.gitignore
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*.html
49 changes: 49 additions & 0 deletions .github/workflows/R-CMD-check.yaml
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# Workflow derived from https://github.com/r-lib/actions/tree/v2/examples
# Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help
on:
push:
branches: [main, master, testing]
pull_request:
branches: [main, master]

name: R-CMD-check

jobs:
R-CMD-check:
runs-on: ${{ matrix.config.os }}

name: ${{ matrix.config.os }} (${{ matrix.config.r }})

strategy:
fail-fast: false
matrix:
config:
- {os: macos-latest, r: 'release'}
- {os: windows-latest, r: 'release'}
- {os: ubuntu-latest, r: 'devel', http-user-agent: 'release'}
- {os: ubuntu-latest, r: 'release'}
- {os: ubuntu-latest, r: 'oldrel-1'}

env:
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
R_KEEP_PKG_SOURCE: yes

steps:
- uses: actions/checkout@v3

- uses: r-lib/actions/setup-pandoc@v2

- uses: r-lib/actions/setup-r@v2
with:
r-version: ${{ matrix.config.r }}
http-user-agent: ${{ matrix.config.http-user-agent }}
use-public-rspm: true

- uses: r-lib/actions/setup-r-dependencies@v2
with:
extra-packages: any::rcmdcheck
needs: check

- uses: r-lib/actions/check-r-package@v2
with:
upload-snapshots: true
50 changes: 50 additions & 0 deletions .github/workflows/test-coverage.yaml
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# Workflow derived from https://github.com/r-lib/actions/tree/v2/examples
# Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help
on:
push:
branches: [main, master, testing]
pull_request:
branches: [main, master]

name: test-coverage

jobs:
test-coverage:
runs-on: ubuntu-latest
env:
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}

steps:
- uses: actions/checkout@v3

- uses: r-lib/actions/setup-r@v2
with:
use-public-rspm: true

- uses: r-lib/actions/setup-r-dependencies@v2
with:
extra-packages: any::covr
needs: coverage

- name: Test coverage
run: |
covr::codecov(
quiet = FALSE,
clean = FALSE,
install_path = file.path(Sys.getenv("RUNNER_TEMP"), "package")
)
shell: Rscript {0}

- name: Show testthat output
if: always()
run: |
## --------------------------------------------------------------------
find ${{ runner.temp }}/package -name 'testthat.Rout*' -exec cat '{}' \; || true
shell: bash

- name: Upload test results
if: failure()
uses: actions/upload-artifact@v3
with:
name: coverage-test-failures
path: ${{ runner.temp }}/package
1 change: 1 addition & 0 deletions README.Rmd
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# rmot

<!-- badges: start -->
[![R-CMD-check](https://github.com/traitecoevo/rmot/actions/workflows/R-CMD-check.yaml/badge.svg)](https://github.com/traitecoevo/rmot/actions/workflows/R-CMD-check.yaml)
<!-- badges: end -->

The goal of 'rmot' is to ...
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2 changes: 2 additions & 0 deletions README.md
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# rmot

<!-- badges: start -->

[![R-CMD-check](https://github.com/traitecoevo/rmot/actions/workflows/R-CMD-check.yaml/badge.svg)](https://github.com/traitecoevo/rmot/actions/workflows/R-CMD-check.yaml)
<!-- badges: end -->

The goal of ‘rmot’ is to …
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17 changes: 17 additions & 0 deletions tests/testthat/test-rmot_assign_data.R
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test_that("Execution and output", {

lm_loblloy <- rmot_model("linear") |>
rmot_assign_data(X = Loblolly$age)

expect_named(lm_loblloy)

expect_visible(lm_loblloy)

expect_type(lm_loblloy, "list")

lm_empty <- rmot_model("linear")

expect_null(lm_empty$X)

expect_true(length(lm_loblloy$X) > 0)
})

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