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  1. SAMSA SAMSA Public

    Programs and documentation for the SAMSA pipeline, version 1.0

    Python 15 6

  2. subsystems subsystems Public

    Code for making bioinformatics work with the SEED subsystems database a little easier.

    Python 7 2

  3. MG-RAST_interfacing MG-RAST_interfacing Public

    Scripts that making working with MG-RAST a bit easier.

    Python 1

  4. samsa2 samsa2 Public

    SAMSA pipeline, version 2.0. An open-source metatranscriptomics pipeline for analyzing microbiome data, built around DIAMOND and customizable reference databases.

    R 53 36