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Export R_PROFILE during the configure step, rather than export #1580

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merged 1 commit into from Nov 8, 2018

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jimhester
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export is run after configure, and R_PROFILE needs to be set for
setup_bioc.

It looks to me like the export stage is always run after configure, which is why the repos were not being set

Stage.new(:builtin, :configure, :always),
Stage.new(:builtin, :prepare, :always),
Stage.new(:builtin, :disable_sudo, :always),
Stage.new(:builtin, :checkout, :always),
Stage.new(:builtin, :export, :always),

An example error this should fix is https://travis-ci.org/ropenscilabs/available/jobs/452418452#L913-L916

cc @LiNk-NY

export is run after configure, and R_PROFILE needs to be set for
`setup_bioc`.
@LiNk-NY
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LiNk-NY commented Nov 8, 2018

Thanks @BanzaiMan ! 🎉

@BanzaiMan BanzaiMan merged commit 0b82a5a into travis-ci:master Nov 8, 2018
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