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tripal_galaxy.views_default.inc
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tripal_galaxy.views_default.inc
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<?php
/**
* @file
* Describes default views.
*/
/**
* Describes default views.
*/
function tripal_galaxy_views_default_views() {
$views = array();
$view = tripal_galaxy_views_job_queue();
$views[$view->name] = $view;
return $views;
}
/**
* Describes the jobs administration view.
*
* @ingroup tripal
*/
function tripal_galaxy_views_job_queue() {
$view = new view();
$view->name = 'galaxy_workflow_submissions';
$view->description = '';
$view->tag = 'default';
$view->base_table = 'tripal_galaxy_workflow_submission';
$view->human_name = 'Galaxy Workflow Submissions';
$view->core = 7;
$view->api_version = '3.0';
$view->disabled = FALSE; /* Edit this to true to make a default view disabled initially */
/* Display: Master */
$handler = $view->new_display('default', 'Master', 'default');
$handler->display->display_options['title'] = 'Galaxy Workflow Submissions';
$handler->display->display_options['use_more_always'] = FALSE;
$handler->display->display_options['access']['type'] = 'perm';
$handler->display->display_options['access']['perm'] = 'administer galaxy';
$handler->display->display_options['cache']['type'] = 'none';
$handler->display->display_options['query']['type'] = 'views_query';
$handler->display->display_options['exposed_form']['type'] = 'basic';
$handler->display->display_options['pager']['type'] = 'full';
$handler->display->display_options['pager']['options']['items_per_page'] = '25';
$handler->display->display_options['style_plugin'] = 'table';
$handler->display->display_options['style_options']['columns'] = array(
'galaxy_workflow_id' => 'galaxy_workflow_id',
'sid' => 'sid',
'wf_sid' => 'wf_sid',
'nid' => 'nid',
'workflow_name' => 'workflow_name',
'servername' => 'servername',
'name' => 'name',
'submit_date' => 'submit_date',
'start_time' => 'start_time',
'end_time' => 'end_time',
'status' => 'status',
'view_results' => 'view_results',
'nothing_1' => 'nothing_1',
'ctools_dropdown' => 'ctools_dropdown',
);
$handler->display->display_options['style_options']['default'] = '-1';
$handler->display->display_options['style_options']['info'] = array(
'galaxy_workflow_id' => array(
'sortable' => 0,
'default_sort_order' => 'asc',
'align' => '',
'separator' => '',
'empty_column' => 0,
),
'sid' => array(
'sortable' => 0,
'default_sort_order' => 'asc',
'align' => '',
'separator' => '',
'empty_column' => 0,
),
'wf_sid' => array(
'sortable' => 0,
'default_sort_order' => 'asc',
'align' => '',
'separator' => '',
'empty_column' => 0,
),
'nid' => array(
'sortable' => 0,
'default_sort_order' => 'asc',
'align' => '',
'separator' => '',
'empty_column' => 0,
),
'workflow_name' => array(
'sortable' => 0,
'default_sort_order' => 'asc',
'align' => '',
'separator' => '',
'empty_column' => 0,
),
'servername' => array(
'sortable' => 0,
'default_sort_order' => 'asc',
'align' => '',
'separator' => '',
'empty_column' => 0,
),
'name' => array(
'sortable' => 0,
'default_sort_order' => 'asc',
'align' => '',
'separator' => '',
'empty_column' => 0,
),
'submit_date' => array(
'sortable' => 0,
'default_sort_order' => 'asc',
'align' => '',
'separator' => '',
'empty_column' => 0,
),
'start_time' => array(
'sortable' => 0,
'default_sort_order' => 'asc',
'align' => '',
'separator' => '',
'empty_column' => 0,
),
'end_time' => array(
'sortable' => 0,
'default_sort_order' => 'asc',
'align' => '',
'separator' => '',
'empty_column' => 0,
),
'status' => array(
'sortable' => 0,
'default_sort_order' => 'asc',
'align' => '',
'separator' => '',
'empty_column' => 0,
),
'view_results' => array(
'align' => '',
'separator' => '',
'empty_column' => 0,
),
'nothing_1' => array(
'align' => '',
'separator' => '',
'empty_column' => 0,
),
'ctools_dropdown' => array(
'align' => '',
'separator' => '',
'empty_column' => 0,
),
);
$handler->display->display_options['style_options']['sticky'] = TRUE;
$handler->display->display_options['style_options']['empty_table'] = TRUE;
/* Header: Global: Text area */
$handler->display->display_options['header']['area']['id'] = 'area';
$handler->display->display_options['header']['area']['table'] = 'views';
$handler->display->display_options['header']['area']['field'] = 'area';
$handler->display->display_options['header']['area']['empty'] = TRUE;
$handler->display->display_options['header']['area']['content'] = 'The following table provides a list of analytical workflows that you have submitted for execution on this site. Click the drop down in the Actions column to view results, view your submission, re-run or delete it.';
$handler->display->display_options['header']['area']['format'] = 'filtered_html';
/* No results behavior: Global: Unfiltered text */
$handler->display->display_options['empty']['area_text_custom']['id'] = 'area_text_custom';
$handler->display->display_options['empty']['area_text_custom']['table'] = 'views';
$handler->display->display_options['empty']['area_text_custom']['field'] = 'area_text_custom';
$handler->display->display_options['empty']['area_text_custom']['label'] = 'No Results';
$handler->display->display_options['empty']['area_text_custom']['empty'] = TRUE;
$handler->display->display_options['empty']['area_text_custom']['content'] = 'There are no workflows for the given filter criteria.';
/* Relationship: Galaxy Workflow Submission: Submitting User */
$handler->display->display_options['relationships']['uid']['id'] = 'uid';
$handler->display->display_options['relationships']['uid']['table'] = 'tripal_galaxy_workflow_submission';
$handler->display->display_options['relationships']['uid']['field'] = 'uid';
$handler->display->display_options['relationships']['uid']['label'] = 'User';
/* Relationship: Galaxy Workflow Submission: The Galaxy Workflow */
$handler->display->display_options['relationships']['galaxy_workflow_id']['id'] = 'galaxy_workflow_id';
$handler->display->display_options['relationships']['galaxy_workflow_id']['table'] = 'tripal_galaxy_workflow_submission';
$handler->display->display_options['relationships']['galaxy_workflow_id']['field'] = 'galaxy_workflow_id';
$handler->display->display_options['relationships']['galaxy_workflow_id']['label'] = 'Workflow';
/* Field: Galaxy Workflow: Internal ID */
$handler->display->display_options['fields']['galaxy_workflow_id']['id'] = 'galaxy_workflow_id';
$handler->display->display_options['fields']['galaxy_workflow_id']['table'] = 'tripal_galaxy_workflow';
$handler->display->display_options['fields']['galaxy_workflow_id']['field'] = 'galaxy_workflow_id';
$handler->display->display_options['fields']['galaxy_workflow_id']['relationship'] = 'galaxy_workflow_id';
$handler->display->display_options['fields']['galaxy_workflow_id']['exclude'] = TRUE;
/* Field: Galaxy Workflow Submission: Submission ID */
$handler->display->display_options['fields']['sid']['id'] = 'sid';
$handler->display->display_options['fields']['sid']['table'] = 'tripal_galaxy_workflow_submission';
$handler->display->display_options['fields']['sid']['field'] = 'sid';
$handler->display->display_options['fields']['sid']['label'] = 'ID';
/* Field: Galaxy Workflow to Webform Submission: Webform Submission ID */
$handler->display->display_options['fields']['wf_sid']['id'] = 'wf_sid';
$handler->display->display_options['fields']['wf_sid']['table'] = 'tripal_galaxy_webform';
$handler->display->display_options['fields']['wf_sid']['field'] = 'wf_sid';
$handler->display->display_options['fields']['wf_sid']['label'] = '';
$handler->display->display_options['fields']['wf_sid']['exclude'] = TRUE;
$handler->display->display_options['fields']['wf_sid']['element_label_colon'] = FALSE;
/* Field: Galaxy Workflow: Node */
$handler->display->display_options['fields']['nid']['id'] = 'nid';
$handler->display->display_options['fields']['nid']['table'] = 'tripal_galaxy_workflow';
$handler->display->display_options['fields']['nid']['field'] = 'nid';
$handler->display->display_options['fields']['nid']['relationship'] = 'galaxy_workflow_id';
$handler->display->display_options['fields']['nid']['label'] = '';
$handler->display->display_options['fields']['nid']['exclude'] = TRUE;
$handler->display->display_options['fields']['nid']['element_label_colon'] = FALSE;
/* Field: User: Uid */
$handler->display->display_options['fields']['uid']['id'] = 'uid';
$handler->display->display_options['fields']['uid']['table'] = 'users';
$handler->display->display_options['fields']['uid']['field'] = 'uid';
$handler->display->display_options['fields']['uid']['relationship'] = 'uid';
$handler->display->display_options['fields']['uid']['label'] = '';
$handler->display->display_options['fields']['uid']['exclude'] = TRUE;
$handler->display->display_options['fields']['uid']['element_label_colon'] = FALSE;
$handler->display->display_options['fields']['uid']['link_to_user'] = FALSE;
/* Field: Galaxy Workflow: Workflow Name */
$handler->display->display_options['fields']['workflow_name']['id'] = 'workflow_name';
$handler->display->display_options['fields']['workflow_name']['table'] = 'tripal_galaxy_workflow';
$handler->display->display_options['fields']['workflow_name']['field'] = 'workflow_name';
$handler->display->display_options['fields']['workflow_name']['relationship'] = 'galaxy_workflow_id';
/* Field: Galaxy Server: Server Name */
$handler->display->display_options['fields']['servername']['id'] = 'servername';
$handler->display->display_options['fields']['servername']['table'] = 'tripal_galaxy';
$handler->display->display_options['fields']['servername']['field'] = 'servername';
$handler->display->display_options['fields']['servername']['relationship'] = 'galaxy_workflow_id';
$handler->display->display_options['fields']['servername']['label'] = 'Galaxy Server';
/* Field: User: Name */
$handler->display->display_options['fields']['name']['id'] = 'name';
$handler->display->display_options['fields']['name']['table'] = 'users';
$handler->display->display_options['fields']['name']['field'] = 'name';
$handler->display->display_options['fields']['name']['relationship'] = 'uid';
/* Field: Galaxy Workflow Submission: Submission Time */
$handler->display->display_options['fields']['submit_date']['id'] = 'submit_date';
$handler->display->display_options['fields']['submit_date']['table'] = 'tripal_galaxy_workflow_submission';
$handler->display->display_options['fields']['submit_date']['field'] = 'submit_date';
$handler->display->display_options['fields']['submit_date']['date_format'] = 'short';
$handler->display->display_options['fields']['submit_date']['second_date_format'] = 'long';
/* Field: Galaxy Workflow Submission: Start Time */
$handler->display->display_options['fields']['start_time']['id'] = 'start_time';
$handler->display->display_options['fields']['start_time']['table'] = 'tripal_galaxy_workflow_submission';
$handler->display->display_options['fields']['start_time']['field'] = 'start_time';
$handler->display->display_options['fields']['start_time']['date_format'] = 'short';
$handler->display->display_options['fields']['start_time']['second_date_format'] = 'long';
/* Field: Galaxy Workflow Submission: End Time */
$handler->display->display_options['fields']['end_time']['id'] = 'end_time';
$handler->display->display_options['fields']['end_time']['table'] = 'tripal_galaxy_workflow_submission';
$handler->display->display_options['fields']['end_time']['field'] = 'end_time';
$handler->display->display_options['fields']['end_time']['date_format'] = 'short';
$handler->display->display_options['fields']['end_time']['second_date_format'] = 'long';
/* Field: Galaxy Workflow Submission: Submission Status */
$handler->display->display_options['fields']['status']['id'] = 'status';
$handler->display->display_options['fields']['status']['table'] = 'tripal_galaxy_workflow_submission';
$handler->display->display_options['fields']['status']['field'] = 'status';
$handler->display->display_options['fields']['status']['label'] = 'Status';
/* Field: Galaxy Workflow Submission: View Results Link */
$handler->display->display_options['fields']['view_results']['id'] = 'view_results';
$handler->display->display_options['fields']['view_results']['table'] = 'tripal_galaxy_workflow_submission';
$handler->display->display_options['fields']['view_results']['field'] = 'view_results';
$handler->display->display_options['fields']['view_results']['relationship'] = 'galaxy_workflow_id';
$handler->display->display_options['fields']['view_results']['label'] = '';
$handler->display->display_options['fields']['view_results']['exclude'] = TRUE;
$handler->display->display_options['fields']['view_results']['alter']['make_link'] = TRUE;
$handler->display->display_options['fields']['view_results']['alter']['path'] = 'user/[uid]/galaxy-jobs/[sid]';
$handler->display->display_options['fields']['view_results']['element_label_colon'] = FALSE;
$handler->display->display_options['fields']['view_results']['hide_empty'] = TRUE;
$handler->display->display_options['fields']['view_results']['hide_alter_empty'] = FALSE;
/* Field: Global: Custom text */
$handler->display->display_options['fields']['nothing_1']['id'] = 'nothing_1';
$handler->display->display_options['fields']['nothing_1']['table'] = 'views';
$handler->display->display_options['fields']['nothing_1']['field'] = 'nothing';
$handler->display->display_options['fields']['nothing_1']['label'] = 'View Submission';
$handler->display->display_options['fields']['nothing_1']['exclude'] = TRUE;
$handler->display->display_options['fields']['nothing_1']['alter']['text'] = 'View Submission';
$handler->display->display_options['fields']['nothing_1']['alter']['make_link'] = TRUE;
$handler->display->display_options['fields']['nothing_1']['alter']['path'] = 'node/[nid]/submission/[wf_sid]';
/* Field: Global: Dropdown links */
$handler->display->display_options['fields']['ctools_dropdown']['id'] = 'ctools_dropdown';
$handler->display->display_options['fields']['ctools_dropdown']['table'] = 'views';
$handler->display->display_options['fields']['ctools_dropdown']['field'] = 'ctools_dropdown';
$handler->display->display_options['fields']['ctools_dropdown']['label'] = 'Actions';
$handler->display->display_options['fields']['ctools_dropdown']['fields'] = array(
'view_results' => 'view_results',
'nothing_1' => 'nothing_1',
);
$handler->display->display_options['fields']['ctools_dropdown']['check_access'] = 0;
/* Sort criterion: Galaxy Workflow Submission: Submission Time */
$handler->display->display_options['sorts']['submit_date']['id'] = 'submit_date';
$handler->display->display_options['sorts']['submit_date']['table'] = 'tripal_galaxy_workflow_submission';
$handler->display->display_options['sorts']['submit_date']['field'] = 'submit_date';
$handler->display->display_options['sorts']['submit_date']['order'] = 'DESC';
$handler->display->display_options['sorts']['submit_date']['expose']['label'] = 'Submission Time';
/* Filter criterion: Galaxy Workflow Submission: Submission Status */
$handler->display->display_options['filters']['status']['id'] = 'status';
$handler->display->display_options['filters']['status']['table'] = 'tripal_galaxy_workflow_submission';
$handler->display->display_options['filters']['status']['field'] = 'status';
$handler->display->display_options['filters']['status']['exposed'] = TRUE;
$handler->display->display_options['filters']['status']['expose']['operator_id'] = 'status_op';
$handler->display->display_options['filters']['status']['expose']['label'] = 'Submission Status';
$handler->display->display_options['filters']['status']['expose']['operator'] = 'status_op';
$handler->display->display_options['filters']['status']['expose']['identifier'] = 'status';
$handler->display->display_options['filters']['status']['is_grouped'] = TRUE;
$handler->display->display_options['filters']['status']['group_info']['label'] = 'Submission Status';
$handler->display->display_options['filters']['status']['group_info']['identifier'] = 'status';
$handler->display->display_options['filters']['status']['group_info']['default_group'] = '1';
$handler->display->display_options['filters']['status']['group_info']['group_items'] = array(
1 => array(
'title' => '- Active -',
'operator' => 'word',
'value' => 'Completed Waiting Processing Error',
),
2 => array(
'title' => 'Completed',
'operator' => '=',
'value' => 'Completed',
),
3 => array(
'title' => 'Processing',
'operator' => '=',
'value' => 'Processing',
),
4 => array(
'title' => 'Waiting',
'operator' => '=',
'value' => 'Waiting',
),
5 => array(
'title' => 'Error',
'operator' => '=',
'value' => 'Error',
),
6 => array(
'title' => 'Deleted',
'operator' => '=',
'value' => 'Deleted',
),
);
/* Filter criterion: Galaxy Workflow: Workflow Name */
$handler->display->display_options['filters']['workflow_name']['id'] = 'workflow_name';
$handler->display->display_options['filters']['workflow_name']['table'] = 'tripal_galaxy_workflow';
$handler->display->display_options['filters']['workflow_name']['field'] = 'workflow_name';
$handler->display->display_options['filters']['workflow_name']['relationship'] = 'galaxy_workflow_id';
$handler->display->display_options['filters']['workflow_name']['operator'] = 'word';
$handler->display->display_options['filters']['workflow_name']['exposed'] = TRUE;
$handler->display->display_options['filters']['workflow_name']['expose']['operator_id'] = 'workflow_name_op';
$handler->display->display_options['filters']['workflow_name']['expose']['label'] = 'Workflow Name';
$handler->display->display_options['filters']['workflow_name']['expose']['operator'] = 'workflow_name_op';
$handler->display->display_options['filters']['workflow_name']['expose']['identifier'] = 'workflow_name';
$handler->display->display_options['filters']['workflow_name']['expose']['remember_roles'] = array(
2 => '2',
1 => 0,
3 => 0,
);
/* Filter criterion: User: Name */
$handler->display->display_options['filters']['uid']['id'] = 'uid';
$handler->display->display_options['filters']['uid']['table'] = 'users';
$handler->display->display_options['filters']['uid']['field'] = 'uid';
$handler->display->display_options['filters']['uid']['relationship'] = 'uid';
$handler->display->display_options['filters']['uid']['value'] = '';
$handler->display->display_options['filters']['uid']['exposed'] = TRUE;
$handler->display->display_options['filters']['uid']['expose']['operator_id'] = 'uid_op';
$handler->display->display_options['filters']['uid']['expose']['label'] = 'User';
$handler->display->display_options['filters']['uid']['expose']['operator'] = 'uid_op';
$handler->display->display_options['filters']['uid']['expose']['identifier'] = 'uid';
$handler->display->display_options['filters']['uid']['expose']['remember_roles'] = array(
2 => '2',
1 => 0,
3 => 0,
);
$handler->display->display_options['filters']['uid']['group_info']['label'] = 'Name';
$handler->display->display_options['filters']['uid']['group_info']['identifier'] = 'uid';
$handler->display->display_options['filters']['uid']['group_info']['remember'] = FALSE;
$handler->display->display_options['filters']['uid']['group_info']['group_items'] = array(
1 => array(),
2 => array(),
3 => array(),
);
/* Display: Admin Galaxy Job Queue */
$handler = $view->new_display('page', 'Admin Galaxy Job Queue', 'page');
$handler->display->display_options['path'] = 'admin/tripal/extension/galaxy/job-queue';
$handler->display->display_options['menu']['type'] = 'tab';
$handler->display->display_options['menu']['title'] = 'Job Queue';
$handler->display->display_options['menu']['description'] = 'The Galaxy Job Queue';
$handler->display->display_options['menu']['weight'] = '15';
$handler->display->display_options['menu']['context'] = 0;
$handler->display->display_options['menu']['context_only_inline'] = 0;
/* Display: User Galaxy Job Queue */
$handler = $view->new_display('page', 'User Galaxy Job Queue', 'page_1');
$handler->display->display_options['defaults']['access'] = FALSE;
$handler->display->display_options['access']['type'] = 'perm';
$handler->display->display_options['access']['perm'] = 'use galaxy';
$handler->display->display_options['defaults']['fields'] = FALSE;
/* Field: Galaxy Workflow: Internal ID */
$handler->display->display_options['fields']['galaxy_workflow_id']['id'] = 'galaxy_workflow_id';
$handler->display->display_options['fields']['galaxy_workflow_id']['table'] = 'tripal_galaxy_workflow';
$handler->display->display_options['fields']['galaxy_workflow_id']['field'] = 'galaxy_workflow_id';
$handler->display->display_options['fields']['galaxy_workflow_id']['relationship'] = 'galaxy_workflow_id';
$handler->display->display_options['fields']['galaxy_workflow_id']['exclude'] = TRUE;
/* Field: Galaxy Workflow Submission: Submission ID */
$handler->display->display_options['fields']['sid']['id'] = 'sid';
$handler->display->display_options['fields']['sid']['table'] = 'tripal_galaxy_workflow_submission';
$handler->display->display_options['fields']['sid']['field'] = 'sid';
$handler->display->display_options['fields']['sid']['label'] = 'ID';
$handler->display->display_options['fields']['sid']['exclude'] = TRUE;
/* Field: Galaxy Workflow to Webform Submission: Webform Submission ID */
$handler->display->display_options['fields']['wf_sid']['id'] = 'wf_sid';
$handler->display->display_options['fields']['wf_sid']['table'] = 'tripal_galaxy_webform';
$handler->display->display_options['fields']['wf_sid']['field'] = 'wf_sid';
$handler->display->display_options['fields']['wf_sid']['label'] = '';
$handler->display->display_options['fields']['wf_sid']['exclude'] = TRUE;
$handler->display->display_options['fields']['wf_sid']['element_label_colon'] = FALSE;
/* Field: Galaxy Workflow: Node */
$handler->display->display_options['fields']['nid']['id'] = 'nid';
$handler->display->display_options['fields']['nid']['table'] = 'tripal_galaxy_workflow';
$handler->display->display_options['fields']['nid']['field'] = 'nid';
$handler->display->display_options['fields']['nid']['relationship'] = 'galaxy_workflow_id';
$handler->display->display_options['fields']['nid']['label'] = '';
$handler->display->display_options['fields']['nid']['exclude'] = TRUE;
$handler->display->display_options['fields']['nid']['element_label_colon'] = FALSE;
/* Field: Galaxy Workflow: Workflow Name */
$handler->display->display_options['fields']['workflow_name']['id'] = 'workflow_name';
$handler->display->display_options['fields']['workflow_name']['table'] = 'tripal_galaxy_workflow';
$handler->display->display_options['fields']['workflow_name']['field'] = 'workflow_name';
$handler->display->display_options['fields']['workflow_name']['relationship'] = 'galaxy_workflow_id';
/* Field: Galaxy Server: Server Name */
$handler->display->display_options['fields']['servername']['id'] = 'servername';
$handler->display->display_options['fields']['servername']['table'] = 'tripal_galaxy';
$handler->display->display_options['fields']['servername']['field'] = 'servername';
$handler->display->display_options['fields']['servername']['relationship'] = 'galaxy_workflow_id';
$handler->display->display_options['fields']['servername']['label'] = 'Galaxy Server';
$handler->display->display_options['fields']['servername']['exclude'] = TRUE;
/* Field: User: Name */
$handler->display->display_options['fields']['name']['id'] = 'name';
$handler->display->display_options['fields']['name']['table'] = 'users';
$handler->display->display_options['fields']['name']['field'] = 'name';
$handler->display->display_options['fields']['name']['relationship'] = 'uid';
$handler->display->display_options['fields']['name']['exclude'] = TRUE;
/* Field: User: Uid */
$handler->display->display_options['fields']['uid']['id'] = 'uid';
$handler->display->display_options['fields']['uid']['table'] = 'users';
$handler->display->display_options['fields']['uid']['field'] = 'uid';
$handler->display->display_options['fields']['uid']['relationship'] = 'uid';
$handler->display->display_options['fields']['uid']['label'] = '';
$handler->display->display_options['fields']['uid']['exclude'] = TRUE;
$handler->display->display_options['fields']['uid']['element_label_colon'] = FALSE;
$handler->display->display_options['fields']['uid']['link_to_user'] = FALSE;
/* Field: Galaxy Workflow Submission: Submission Time */
$handler->display->display_options['fields']['submit_date']['id'] = 'submit_date';
$handler->display->display_options['fields']['submit_date']['table'] = 'tripal_galaxy_workflow_submission';
$handler->display->display_options['fields']['submit_date']['field'] = 'submit_date';
$handler->display->display_options['fields']['submit_date']['date_format'] = 'short';
$handler->display->display_options['fields']['submit_date']['second_date_format'] = 'long';
/* Field: Galaxy Workflow Submission: Start Time */
$handler->display->display_options['fields']['start_time']['id'] = 'start_time';
$handler->display->display_options['fields']['start_time']['table'] = 'tripal_galaxy_workflow_submission';
$handler->display->display_options['fields']['start_time']['field'] = 'start_time';
$handler->display->display_options['fields']['start_time']['date_format'] = 'short';
$handler->display->display_options['fields']['start_time']['second_date_format'] = 'long';
/* Field: Galaxy Workflow Submission: End Time */
$handler->display->display_options['fields']['end_time']['id'] = 'end_time';
$handler->display->display_options['fields']['end_time']['table'] = 'tripal_galaxy_workflow_submission';
$handler->display->display_options['fields']['end_time']['field'] = 'end_time';
$handler->display->display_options['fields']['end_time']['date_format'] = 'short';
$handler->display->display_options['fields']['end_time']['second_date_format'] = 'long';
/* Field: Galaxy Workflow Submission: Submission Status */
$handler->display->display_options['fields']['status']['id'] = 'status';
$handler->display->display_options['fields']['status']['table'] = 'tripal_galaxy_workflow_submission';
$handler->display->display_options['fields']['status']['field'] = 'status';
$handler->display->display_options['fields']['status']['label'] = 'Status';
/* Field: Galaxy Workflow Submission: View Results Link */
$handler->display->display_options['fields']['view_results']['id'] = 'view_results';
$handler->display->display_options['fields']['view_results']['table'] = 'tripal_galaxy_workflow_submission';
$handler->display->display_options['fields']['view_results']['field'] = 'view_results';
$handler->display->display_options['fields']['view_results']['relationship'] = 'galaxy_workflow_id';
$handler->display->display_options['fields']['view_results']['label'] = '';
$handler->display->display_options['fields']['view_results']['exclude'] = TRUE;
$handler->display->display_options['fields']['view_results']['element_label_colon'] = FALSE;
$handler->display->display_options['fields']['view_results']['hide_empty'] = TRUE;
/* Field: Global: Custom text */
$handler->display->display_options['fields']['nothing_1']['id'] = 'nothing_1';
$handler->display->display_options['fields']['nothing_1']['table'] = 'views';
$handler->display->display_options['fields']['nothing_1']['field'] = 'nothing';
$handler->display->display_options['fields']['nothing_1']['label'] = 'View Submission';
$handler->display->display_options['fields']['nothing_1']['exclude'] = TRUE;
$handler->display->display_options['fields']['nothing_1']['alter']['text'] = 'View Submission';
$handler->display->display_options['fields']['nothing_1']['alter']['make_link'] = TRUE;
$handler->display->display_options['fields']['nothing_1']['alter']['path'] = 'node/[nid]/submission/[wf_sid]';
$handler->display->display_options['fields']['nothing_1']['hide_empty'] = TRUE;
$handler->display->display_options['fields']['nothing_1']['hide_alter_empty'] = TRUE;
/* Field: Global: Custom text */
$handler->display->display_options['fields']['nothing']['id'] = 'nothing';
$handler->display->display_options['fields']['nothing']['table'] = 'views';
$handler->display->display_options['fields']['nothing']['field'] = 'nothing';
$handler->display->display_options['fields']['nothing']['label'] = 'Re-run';
$handler->display->display_options['fields']['nothing']['exclude'] = TRUE;
$handler->display->display_options['fields']['nothing']['alter']['text'] = 'Re-run';
$handler->display->display_options['fields']['nothing']['alter']['make_link'] = TRUE;
$handler->display->display_options['fields']['nothing']['alter']['path'] = 'node/[nid]';
/* Field: Global: Custom text */
$handler->display->display_options['fields']['nothing_2']['id'] = 'nothing_2';
$handler->display->display_options['fields']['nothing_2']['table'] = 'views';
$handler->display->display_options['fields']['nothing_2']['field'] = 'nothing';
$handler->display->display_options['fields']['nothing_2']['label'] = 'Delete';
$handler->display->display_options['fields']['nothing_2']['exclude'] = TRUE;
$handler->display->display_options['fields']['nothing_2']['alter']['text'] = 'Delete';
$handler->display->display_options['fields']['nothing_2']['alter']['make_link'] = TRUE;
$handler->display->display_options['fields']['nothing_2']['alter']['path'] = 'node/[nid]/submission/[wf_sid]/delete?destination=user/[uid]/galaxy-jobs';
/* Field: Global: Dropdown links */
$handler->display->display_options['fields']['ctools_dropdown']['id'] = 'ctools_dropdown';
$handler->display->display_options['fields']['ctools_dropdown']['table'] = 'views';
$handler->display->display_options['fields']['ctools_dropdown']['field'] = 'ctools_dropdown';
$handler->display->display_options['fields']['ctools_dropdown']['label'] = 'Actions';
$handler->display->display_options['fields']['ctools_dropdown']['fields'] = array(
'view_results' => 'view_results',
'nothing_1' => 'nothing_1',
'nothing' => 'nothing',
'nothing_2' => 'nothing_2',
);
$handler->display->display_options['fields']['ctools_dropdown']['check_access'] = 0;
$handler->display->display_options['fields']['ctools_dropdown']['destination'] = FALSE;
$handler->display->display_options['defaults']['filter_groups'] = FALSE;
$handler->display->display_options['defaults']['filters'] = FALSE;
/* Filter criterion: Galaxy Workflow Submission: Submission Status */
$handler->display->display_options['filters']['status']['id'] = 'status';
$handler->display->display_options['filters']['status']['table'] = 'tripal_galaxy_workflow_submission';
$handler->display->display_options['filters']['status']['field'] = 'status';
$handler->display->display_options['filters']['status']['exposed'] = TRUE;
$handler->display->display_options['filters']['status']['expose']['operator_id'] = 'status_op';
$handler->display->display_options['filters']['status']['expose']['label'] = 'Submission Status';
$handler->display->display_options['filters']['status']['expose']['operator'] = 'status_op';
$handler->display->display_options['filters']['status']['expose']['identifier'] = 'status';
$handler->display->display_options['filters']['status']['is_grouped'] = TRUE;
$handler->display->display_options['filters']['status']['group_info']['label'] = 'Submission Status';
$handler->display->display_options['filters']['status']['group_info']['identifier'] = 'status';
$handler->display->display_options['filters']['status']['group_info']['default_group'] = '1';
$handler->display->display_options['filters']['status']['group_info']['group_items'] = array(
1 => array(
'title' => '- Active -',
'operator' => 'word',
'value' => 'Completed Waiting Processing Error Submitted',
),
2 => array(
'title' => 'Completed',
'operator' => '=',
'value' => 'Completed',
),
3 => array(
'title' => 'Processing',
'operator' => '=',
'value' => 'Processing',
),
4 => array(
'title' => 'Submitted',
'operator' => '=',
'value' => 'Submitted',
),
5 => array(
'title' => 'Waiting',
'operator' => '=',
'value' => 'Waiting',
),
6 => array(
'title' => 'Error',
'operator' => '=',
'value' => 'Error',
),
7 => array(
'title' => 'Deleted',
'operator' => '=',
'value' => 'Deleted',
),
);
/* Filter criterion: Galaxy Workflow: Workflow Name */
$handler->display->display_options['filters']['workflow_name']['id'] = 'workflow_name';
$handler->display->display_options['filters']['workflow_name']['table'] = 'tripal_galaxy_workflow';
$handler->display->display_options['filters']['workflow_name']['field'] = 'workflow_name';
$handler->display->display_options['filters']['workflow_name']['relationship'] = 'galaxy_workflow_id';
$handler->display->display_options['filters']['workflow_name']['operator'] = 'word';
$handler->display->display_options['filters']['workflow_name']['exposed'] = TRUE;
$handler->display->display_options['filters']['workflow_name']['expose']['operator_id'] = 'workflow_name_op';
$handler->display->display_options['filters']['workflow_name']['expose']['label'] = 'Workflow Name';
$handler->display->display_options['filters']['workflow_name']['expose']['operator'] = 'workflow_name_op';
$handler->display->display_options['filters']['workflow_name']['expose']['identifier'] = 'workflow_name';
$handler->display->display_options['filters']['workflow_name']['expose']['remember_roles'] = array(
2 => '2',
1 => 0,
3 => 0,
);
/* Filter criterion: User: Current */
$handler->display->display_options['filters']['uid_current']['id'] = 'uid_current';
$handler->display->display_options['filters']['uid_current']['table'] = 'users';
$handler->display->display_options['filters']['uid_current']['field'] = 'uid_current';
$handler->display->display_options['filters']['uid_current']['relationship'] = 'uid';
$handler->display->display_options['filters']['uid_current']['value'] = '1';
$handler->display->display_options['path'] = 'user/%/galaxy-jobs';
$handler->display->display_options['menu']['type'] = 'tab';
$handler->display->display_options['menu']['title'] = 'Analyses';
$handler->display->display_options['menu']['description'] = 'Sumitted Workflow Analyses';
$handler->display->display_options['menu']['weight'] = '0';
$handler->display->display_options['menu']['name'] = 'user-menu';
$handler->display->display_options['menu']['context'] = 0;
$handler->display->display_options['menu']['context_only_inline'] = 0;
return $view;
}