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download db MEGARES #210

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ValeriiaLadyhina opened this issue Jun 18, 2024 · 0 comments
Open

download db MEGARES #210

ValeriiaLadyhina opened this issue Jun 18, 2024 · 0 comments

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@ValeriiaLadyhina
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Hej!

I have a problem with downloading Megares db. There is one issue opened with upgrade of URL for Megares c3.0 . Which I tried to update in the code but I didn't succed. Can you please help with update to a newer version of megares?

abricate-get_db --db megares --force
Setting up 'megares' in '/Users/vana0005/Pilot_study/abricate/db/megares'
Downloading: https://megares.meglab.org/download/megares_v2.00.zip
HTTP Result: 403
Destination: megares.zip
Filesize: 55162 bytes
Archive: megares.zip
End-of-central-directory signature not found. Either this file is not
a zipfile, or it constitutes one disk of a multi-part archive. In the
latter case the central directory and zipfile comment will be found on
the last disk(s) of this archive.
unzip: cannot find zipfile directory in one of megares.zip or
megares.zip.zip, and cannot find megares.zip.ZIP, period.
load_fasta:

------------- EXCEPTION -------------
MSG: file argument provided, but with an undefined value
STACK Bio::SeqIO::new /Users/vana0005/Pilot_study/abricate/lib/perl5/site_perl/Bio/SeqIO.pm:394
STACK main::load_fasta /Users/vana0005/Pilot_study/abricate/bin/abricate-get_db:728
STACK main::get_megares /Users/vana0005/Pilot_study/abricate/bin/abricate-get_db:353
STACK toplevel /Users/vana0005/Pilot_study/abricate/bin/abricate-get_db:60

Thank you in advance:)

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