Add debug log (#1151)

fence/auth.py

@@ -35,7 +35,10 @@ def get_jwt():
     try:
         bearer, token = header.split(" ")
     except ValueError:
-        raise Unauthorized("authorization header not in expected format")
+        msg = "authorization header not in expected format"
+        logger.debug(f"{msg}. Received header: {header}")
+        logger.error(f"{msg}.")
+        raise Unauthorized(msg)
     if bearer.lower() != "bearer":
         raise Unauthorized("expected bearer token in auth header")
     return token

fence/jwt/utils.py

@@ -1,8 +1,13 @@
 import flask
 
+from cdislogging import get_logger
+
 from fence.errors import Unauthorized
 
 
+logger = get_logger(__name__)
+
+
 def get_jwt_header():
     """
     Get the user's JWT from the Authorization header, or raise Unauthorized on failure.
@@ -18,5 +23,8 @@ def get_jwt_header():
     try:
         jwt = header.split(" ")[1]
     except IndexError:
-        raise Unauthorized("authorization header missing token")
+        msg = "authorization header missing token"
+        logger.debug(f"{msg}. Received header: {header}")
+        logger.error(f"{msg}.")
+        raise Unauthorized(msg)
     return jwt

fence/sync/sync_users.py

@@ -1546,7 +1546,7 @@ def _download(self, dbgap_config):
             return dbgap_files
         except Exception as e:
             self.logger.error(e)
-            exit(1)
+            raise
 
     def _sync(self, sess):
         """

pyproject.toml

@@ -22,7 +22,7 @@ alembic = "^1.7.7"
 authlib = {git = "https://github.com/uc-cdis/authlib", rev = "v0.11_CVE_patch_v1"}
 # authlib = "*" # let authutils decide which version we're using
 
-authutils = "^6.2.2"
+authutils = "<7"
 bcrypt = "^3.1.4"
 boto3 = "*"
 botocore = "*"