@uc-cdis

CDIS

Center for Data Intensive Science @ University of Chicago

Pinned repositories

  1. fence

    AuthN/AuthZ OIDC Service

    Python 4 1

  2. indexd

    Index service server

    Python 2 3

  3. data-portal

    Windmill: data portal for metadata submission and query

    JavaScript 4

  4. sheepdog

    API for herding data submissions

    Python 2 3

  5. peregrine

    GraphQL search API service

    Python 2

  6. cloud-automation

    Automation for standing up Gen3 commons on AWS, GCP, Azure, and on-prem

    Shell 2 2

  • Automation for standing up Gen3 commons on AWS, GCP, Azure, and on-prem

    Shell 2 2 Apache-2.0 Updated Aug 17, 2018
  • JavaScript Updated Aug 16, 2018
  • GraphQL search API service

    Python 2 Apache-2.0 Updated Aug 16, 2018
  • python wrapper and metaschema for datadictionary

    Python Apache-2.0 Updated Aug 16, 2018
  • Data dictionary for NIAID Commons project

    Python 2 Apache-2.0 Updated Aug 16, 2018
  • AuthN/AuthZ OIDC Service

    Python 4 1 Apache-2.0 Updated Aug 16, 2018
  • Data dictionary to collect GTEx dataset

    Python 1 Apache-2.0 Updated Aug 16, 2018
  • API for herding data submissions

    Python 2 3 Apache-2.0 Updated Aug 16, 2018
  • gen3 arranger server - graphql to elastic search

    Shell Updated Aug 16, 2018
  • ETL

    Python Updated Aug 16, 2018
  • Python 1 1 BSD-2-Clause Updated Aug 16, 2018
  • docker-compose for ETL

    Updated Aug 16, 2018
  • Windmill: data portal for metadata submission and query

    JavaScript 4 Apache-2.0 Updated Aug 16, 2018
  • Updated Aug 16, 2018
  • Deploy Gen3 using Docker compose

    Python Apache-2.0 Updated Aug 16, 2018
  • Python Apache-2.0 Updated Aug 15, 2018
  • Collection of helpful scripts for mapping, ETL, automation and others related to PlanX bioinformatics team. It includes tools for data model and data dictionary creation as well as data submission.

    Python Updated Aug 15, 2018
  • Manifests tracking service versions to release to each environment

    1 Apache-2.0 Updated Aug 15, 2018
  • auth utilities for gen3 microservices

    Python Apache-2.0 Updated Aug 15, 2018
  • Index service server

    Python 2 3 Apache-2.0 Updated Aug 15, 2018
  • key value metadata service

    Python Apache-2.0 Updated Aug 15, 2018
  • ETL process to transform and submit metadata from KF dataservice API to Gen3

    Updated Aug 15, 2018
  • Prototype index service client.

    Python Apache-2.0 Updated Aug 15, 2018
  • Tool to transfer data and metadata from ImmPort to NIAID Data Hub

    CSS Updated Aug 15, 2018
  • gen3 rbac policy engine

    Go Apache-2.0 Updated Aug 14, 2018
  • Jupyter notebook and shinyR apps for NIAID Data Hub demo

    Python Apache-2.0 Updated Aug 10, 2018
  • For work on the NASA GEO Global Flood Project

    Jupyter Notebook Updated Aug 9, 2018
  • Cloud Management Library (Wrapping Cloud APIs)

    Python Apache-2.0 Updated Aug 9, 2018
  • Base UI component in gen3

    Updated Aug 9, 2018
  • Repository intended to store scripts for the kubernetes project

    Shell Updated Aug 9, 2018