Merge branch 'master' of github.com:uc-cdis/indexd into chore/python3

.gitattributes

@@ -0,0 +1,21 @@
+.gitattributes export-ignore
+.gitignore export-ignore
+.travis.yml export-ignore
+Dockerfile export-ignore
+Jenkinsfile export-ignore
+Jenkinsfile.security export-ignore
+LICENSE export-ignore
+NOTICE export-ignore
+README.md export-ignore
+TestDockerfile export-ignore
+# bin
+deployment export-ignore
+# indexd
+openapis export-ignore
+pull_request_template.md export-ignore
+requirements.txt export-ignore
+setup.cfg export-ignore
+# setup.py
+test-requirements.txt export-ignore
+tests export-ignore
+# wsgi.py

.travis.yml

@@ -24,4 +24,11 @@ install:
     - "python setup.py install --force"
     - "pip install -r test-requirements.txt"
 
-script: "py.test -vv tests"
+script: "py.test -vv --cov=indexd --cov-report xml tests"
+
+after_script:
+  - COVERALLS_REPO_TOKEN=$COVERALLS_TOKEN coveralls
+
+env:
+  global:
+    secure: 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

Jenkinsfile.security

@@ -0,0 +1,6 @@
+#!groovy
+
+@Library('cdis-jenkins-lib@master') _
+
+securityPipeline {
+}

README.md

@@ -1,6 +1,6 @@
 Indexd
 ===
-![version](https://img.shields.io/github/release/uc-cdis/indexd.svg) [![Apache license](http://img.shields.io/badge/license-Apache-blue.svg?style=flat)](LICENSE) [![Travis](https://travis-ci.org/uc-cdis/indexd.svg?branch=master)](https://travis-ci.org/uc-cdis/indexd)
+![version](https://img.shields.io/github/release/uc-cdis/indexd.svg) [![Apache license](http://img.shields.io/badge/license-Apache-blue.svg?style=flat)](LICENSE) [![Travis](https://travis-ci.org/uc-cdis/indexd.svg?branch=master)](https://travis-ci.org/uc-cdis/indexd) [![Coverage Status](https://coveralls.io/repos/github/uc-cdis/indexd/badge.svg?branch=master)](https://coveralls.io/github/uc-cdis/indexd?branch=master)
 
 Indexd is a data indexing and tracking service. It is intended to be
 distributed, hash-based indexing service, designed to be accessed via a

test-requirements.txt

@@ -1,6 +1,8 @@
 -r requirements.txt
+coveralls
 mock
 pytest==3.0.6
+pytest-cov==2.5.1
 pytest-flask==0.8.1
 PyYAML==5.1
 swagger_spec_validator