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V2.15.1b #676

Merged
merged 180 commits into from
Oct 31, 2023
Merged

V2.15.1b #676

merged 180 commits into from
Oct 31, 2023

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julesghub
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@julesghub julesghub commented Oct 31, 2023 •
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New:

  • Move to Petsc-3.19.4
  • New 3D free surface implementation. (Not fully tested).
  • New install guides for Gadi and setonix.

Changes:

  • N/A

Fixes:

julesghub and others added 30 commits February 3, 2022 17:27
@julesghub
Updating development version to 2.13-dev
096883c
@julesghub
Release guidelines update
2dc2abb
@rbeucher
Add Changes to Changelog (#604)
d3b3db7
@rbeucher
Remoev UWGeodynamics installation from dockerfiles
97cf779
@julesghub
Petsc 3.17 compatibility and removing duplicate examples python scripts
1fc1674
@rbeucher
Add petsc variants to conda recipe
ba75c2d
@rbeucher
Add python 3.10 conda builds to actions.
aa7df08
@rbeucher
Change PETSC and MPICH versions
d88e59d
@rbeucher
Fix MPICH complaining...
a95c443
@rbeucher
Getting Dockerfiles ready: Ubuntu 22.04LTS and python 3.10.
d6e9551 
Note that this will fail for now because of h5py not being
compatible. PR is on its way.
@rbeucher
Update README
17cb0a5
@rbeucher
Update README
ff69c06
@rbeucher
Merge branch 'development' of github.com:underworldcode/underworld2 i…
eccc6a0 
…nto development
@rbeucher
Transfer UWGeo documentation to Underworld
6721f46
@rbeucher
Remove python3-numpy-dbg for now
026ebf3
@rbeucher
Fix Documentation Links (UWGeodynamics)
d9108d1 
Fix visualisation imports
@rbeucher
Fix imports (UWGeodynamics)
88df5a4
@rbeucher
Change Depth documentation toctree
29f322a
@rbeucher
UWGeodynamics Merging
2935e5f
@rbeucher
Run tests
2f8b7d5
@rbeucher
Move tests
67ee2ad
@rbeucher
H5py 3.7 is released, Use it in docker.
5b2543d
@rbeucher
Typo in Petsc Dockerfile
a1f2072
@julesghub
Getting UWGeo internals to use uw2 mpi4py interface (#612)
c7631df 
* Getting UWGeo internals to use uw2 mpi4py interface
* Update CHANGES.md
@julesghub
ask per 2.13 release (#615)
af142bb 
2.13 release
Co-authored-by: Romain Beucher <romain.beucher@anu.edu.au>
@julesghub
Update _version.py
ef01686
@julesghub
Fix for analytic ID, which changed during cmake update. Ganalytics sh…
ffcb1c6 
…ould now be right
@julesghub
Merge branch 'development' of github.com:underworldcode/underworld2 i…
7aa0427 
…nto development
@julesghub
Merge branch 'master' into development
3321314
@julesghub
Typo fix for 3.10
508ecca
julesghub and others added 29 commits February 21, 2023 11:16
@julesghub
Update for 2.14.2
20c596e 
* Fixes for temperatureDot checkpoint/restarting.
* Petsc Dockerfile updates for h5py
@julesghub
Fixing the np.int deprecation issue.
caf9ca0 
fixes #652
@julesghub
Fixing some test.
d9106ca 
nbmark and matplotlib are needed for the tests.
@julesghub
Fixing/Shortening some models so they pass CI
8c0dc94
@julesghub
removing ipynb version
46a3f4d
@julesghub
Fixing all test in ./doc/test/* to not require matplotlib
f0571b5
@julesghub
update workflow with the new script name
334e9e1
@julesghub
Updating python dependencies.
a525a4b 
  * Swig is a build dependency
  * Numpy version reducing to 1.20.3 for setonix
@julesghub
Fixes for checkpointing/restart with freeSurface's in UWGeo
438994e 
* Fix for #657
* Added path check in utils/_io.py
@julesghub
1st cut adding Ben Knight's 3D surface veclocity code. Test model to …
8dbe68d 
…come
@bknight1
Upload 3D SP example
c15b504
@julesghub
Adding setonix install guide
75c21aa
@julesghub
starting for new release uw2.15
a90150e
@bknight1
Update surfaceProcesses.py
644807b 
Update timeField to record time of deposition of sediment in SP functions
@bknight1
Update surfaceProcesses.py
de69346 
Fix typo in 3D surface.

Also reset time of the air material to the model time
@bknight1
Update surfaceProcesses.py
6fe6a60 
fixed typo in func
@julesghub
updating the setonix jobs runners
75bdcaa
@bknight1
Update surfaceProcesses.py
a025399 
Simplify 2D velocity and diffusivity SP functions
@bknight1
Update surfaceProcesses.py
7e93bf8 
Didn't create object to bcast surface function to
@bknight1
Update surfaceProcesses
b851c9b 
Revert back to MPI gather of data over evaluate_global

Update the examples
@julesghub
Adding melt dynamic heating to the advection diffusion solver
116a887 
see issue #669
@julesghub
docker utils updates
4318bb2
@julesghub
Adding some final fixes to the dockerfile scripts
2c01c11
@julesghub
Update CHANGES.md
70ecae4
@julesghub
Remove obsolete glucifer bits
9237721
@julesghub
Update dockerfile Badlands install and CHANGES.md
c9e3d6a
@julesghub
Update CI for docker builds
8b7263b
@julesghub
Fixing the velocitySurface 2D and 3D implementation to handle restarts.
99753e5 
Changes also include:
* Renaming the surface tracers to prevent unexpected overwrites
* The surfaceProcess class saving the passive tracer key to use during
initialisation and solve. This is to make the code not save an instance
of the pt to the swarm incase the pt is swapped in/out of Model memory.
And helps with code readability.
@julesghub
Get the latest release of badlands from pypi
f73509e
@julesghub julesghub merged commit 79402f5 into master Oct 31, 2023
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3 participants
@julesghub @rbeucher @bknight1