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@urmi-21
urmi-21 committed Jan 18, 2021
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Expand Up @@ -73,7 +73,7 @@ Allows fast and easy development of bioinformatics pipelines in python by provid


## Examples
#### Get started with the basic [tutorial](https://pyrpipe.readthedocs.io/en/latest/?badge=latest).Read the documentation [here](https://pyrpipe.readthedocs.io/en/latest/?badge=latest). Several examples are provided [here](https://github.com/urmi-21/pyrpipe/tree/master/case_studies)
#### Get started with the basic [tutorial](https://pyrpipe.readthedocs.io/en/latest/?badge=latest). Read the documentation [here](https://pyrpipe.readthedocs.io/en/latest/?badge=latest). Several examples are provided [here](https://github.com/urmi-21/pyrpipe/tree/master/case_studies)

### Download, trim and align RNA-Seq data
Following python code downloads data from SRA, uses Trim Galore to trim the fastq files and STAR to align reads.
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