Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Wikidata Elastic Search - Backend Implementation #14

Merged
merged 11 commits into from
Jun 6, 2023
Merged
Show file tree
Hide file tree
Changes from 4 commits
Commits
File filter

Filter by extension

Filter by extension

Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
13 changes: 3 additions & 10 deletions sand/app.py
Original file line number Diff line number Diff line change
Expand Up @@ -37,25 +37,18 @@
generate_readonly_api_4dict(
"entities",
serialize=serialize_entity,
id2ent=ChainedMapping(
EntityAR(), import_attr(SETTINGS["entity"]["default"])
),
id2ent=EntityAR(),
),
generate_readonly_api_4dict(
"classes",
serialize=serialize_class,
id2ent=ChainedMapping(
OntClassAR(), import_attr(SETTINGS["ont_classes"]["default"])
),
id2ent=OntClassAR(),
unique_field_funcs={"uri": OntClass.uri2id},
),
generate_readonly_api_4dict(
"properties",
serialize=serialize_property,
id2ent=ChainedMapping(
OntPropertyAR(),
import_attr(SETTINGS["ont_props"]["default"]),
),
id2ent=OntPropertyAR(),
unique_field_funcs={"uri": OntProperty.uri2id},
),
],
Expand Down
24 changes: 15 additions & 9 deletions sand/controllers/search.py
Original file line number Diff line number Diff line change
@@ -1,18 +1,21 @@
import threading
from typing import Dict, List
from typing import Dict, List, Union
from flask.blueprints import Blueprint
from sm.misc.funcs import import_func
from sand.config import SETTINGS
from flask import request, jsonify

from sand.extension_interface.search import ISearch
from sand.extension_interface.search import IEntitySearch, IOntologySearch
from sand.models.search import SearchPayload
from gena.serializer import get_dataclass_serializer

search_bp = Blueprint("search", "search")

GetSearchCache = threading.local()
serializer = get_dataclass_serializer(SearchPayload)


def get_search(name) -> ISearch:
def get_search(name) -> Union[IEntitySearch, IOntologySearch]:
punith300i marked this conversation as resolved.
Show resolved Hide resolved
"""
Returns an implementation of an ISearch Interface from the
configuration file.
Expand All @@ -33,23 +36,26 @@ def search_classes():
"""API Route to search for classes with their names"""
search_text = request.args.get('q')
wikidata_search = get_search('classes')
payload = wikidata_search.find_class_by_name(search_text)
return jsonify(payload)
search_payload = wikidata_search.find_class_by_name(search_text)
serialized_payload = serializer(search_payload)
punith300i marked this conversation as resolved.
Show resolved Hide resolved
return jsonify(serialized_payload)


@search_bp.route(f"/{search_bp.name}/entities", methods=["GET"])
def search_entities():
"""API Route to search for entities with their names"""
search_text = request.args.get('q')
wikidata_search = get_search('entities')
payload = wikidata_search.find_entity_by_name(search_text)
return jsonify(payload)
search_payload = wikidata_search.find_entity_by_name(search_text)
serialized_payload = serializer(search_payload)
return jsonify(serialized_payload)


@search_bp.route(f"/{search_bp.name}/props", methods=["GET"])
def search_props():
"""API Route to search for properties with their names"""
search_text = request.args.get('q')
wikidata_search = get_search('props')
payload = wikidata_search.find_props_by_name(search_text)
return jsonify(payload)
search_payload = wikidata_search.find_props_by_name(search_text)
serialized_payload = serializer(search_payload)
return jsonify(serialized_payload)
24 changes: 15 additions & 9 deletions sand/extension_interface/search.py
Original file line number Diff line number Diff line change
@@ -1,23 +1,29 @@
from abc import ABC, abstractmethod
from typing import Dict
from sand.models.search import SearchPayload
punith300i marked this conversation as resolved.
Show resolved Hide resolved


class ISearch(ABC):
""" Search Interface to support searches from multiple
class IEntitySearch(ABC):
""" Entity Search Interface to support searches from multiple
KG datastores.
"""

@abstractmethod
def find_class_by_name(self, search_text: str) -> Dict:
"""Search Class using name"""
def find_entity_by_name(self, search_text: str) -> SearchPayload:
punith300i marked this conversation as resolved.
Show resolved Hide resolved
"""Search Entity using name"""
pass


class IOntologySearch(ABC):
""" Class and Property Ontology Search Interface to support searches from multiple
KG datastores.
"""

@abstractmethod
def find_entity_by_name(self, search_text: str) -> Dict:
"""Search Entity using name"""
def find_class_by_name(self, search_text: str) -> SearchPayload:
"""Search Class using name"""
pass

@abstractmethod
def find_props_by_name(self, search_text: str) -> Dict:
def find_props_by_name(self, search_text: str) -> SearchPayload:
"""Search properties using name"""
pass
pass
76 changes: 37 additions & 39 deletions sand/extensions/search/wikidata_search.py
Original file line number Diff line number Diff line change
@@ -1,17 +1,16 @@
import requests
from flask import request, jsonify
from typing import Dict
import nh3
from sand.controllers.search import ISearch
from sand.extension_interface.search import IEntitySearch, IOntologySearch
from sand.models.entity import Entity
from sand.models.ontology import OntClass, OntProperty
from sand.models.ontology import OntClass, OntProperty, OntClassAR
from sand.models.search import SearchItem, SearchPayload


class WikidataSearch(ISearch):
class WikidataSearch(IEntitySearch, IOntologySearch):

def __init__(self):
self.wikidata_url = "https://www.wikidata.org/w/api.php"
self.local_class_idsearch_uri = "http://0.0.0.0:5525/api/classes/"
self.PARAMS = {
"action": "query",
"format": "json",
Expand All @@ -22,12 +21,6 @@ def __init__(self):
"srlimit": 10,
"srprop": "snippet|titlesnippet"
}
self.search_item_template = {
"label": "",
"id": "",
"description": "",
"uri": "",
}

def get_class_search_params(self, search_text: str) -> Dict:
"""Updates class search parameters for wikidata API"""
Expand All @@ -36,10 +29,9 @@ def get_class_search_params(self, search_text: str) -> Dict:
class_params['srsearch'] = f"haswbstatement:P279 {search_text}"
return class_params

def get_local_class_properties(self, id: str) -> Dict:
def get_local_class_properties(self, id: str) -> OntClass:
"""Calls local class search API to fetch all class metadata using class ID"""
api_data = requests.get(self.local_class_idsearch_uri + str(id))
return api_data.json()
return OntClassAR()[id]
punith300i marked this conversation as resolved.
Show resolved Hide resolved

def get_entity_search_params(self, search_text: str) -> Dict:
"""Updates entity search parameters for wikidata API"""
Expand All @@ -55,51 +47,57 @@ def get_props_search_params(self, search_text: str) -> Dict:
props_params['srsearch'] = search_text
return props_params

def find_class_by_name(self, search_text: str) -> Dict:
def find_class_by_name(self, search_text: str) -> SearchPayload:
"""
Uses Wikidata API to search for classes using their name/text.
Uses local ID based class search to fetch label and description data.
"""
request_params = self.get_class_search_params(search_text)
api_data = requests.get(self.wikidata_url, request_params)
search_items = api_data.json()['query']['search']
payload = {"items": []}
payload_items = []
for search_item in search_items:
item = self.search_item_template.copy()
item['id'] = search_item['title']
local_class_props = self.get_local_class_properties(item['id'])
item['label'] = local_class_props['label']
item['description'] = local_class_props['description']
item['uri'] = OntClass.id2uri(item['id'])
payload['items'].append(item)
local_class_props = self.get_local_class_properties(search_item['title'])
item = SearchItem(
label=local_class_props.label,
id=search_item['title'],
description=local_class_props.description,
uri=OntClass.id2uri(search_item['title'])
)
payload_items.append(item)
payload = SearchPayload(payload_items)
return payload

def find_entity_by_name(self, search_text: str) -> Dict:
def find_entity_by_name(self, search_text: str) -> SearchPayload:
"""Uses Wikidata API to search for entities using their name/text."""
request_params = self.get_entity_search_params(search_text)
api_data = requests.get(self.wikidata_url, request_params)
search_items = api_data.json()['query']['search']
payload = {"items": []}
payload_items = []
for search_item in search_items:
item = self.search_item_template.copy()
item['label'] = nh3.clean(search_item['titlesnippet'], tags=set())
item['id'] = search_item['title']
item['description'] = nh3.clean(search_item['snippet'], tags=set())
item['uri'] = Entity.id2uri(item['id'])
payload['items'].append(item)
item = SearchItem(
label=nh3.clean(search_item['titlesnippet'], tags=set()),
id=search_item['title'],
description=nh3.clean(search_item['snippet'], tags=set()),
uri=Entity.id2uri(search_item['title'])
)
payload_items.append(item)
payload = SearchPayload(payload_items)
return payload

def find_props_by_name(self, search_text: str) -> Dict:
def find_props_by_name(self, search_text: str) -> SearchPayload:
"""Uses Wikidata API to search for properties using their name/text."""
request_params = self.get_props_search_params(search_text)
api_data = requests.get(self.wikidata_url, request_params)
search_items = api_data.json()['query']['search']
payload = {"items": []}
payload_items = []
for search_item in search_items:
item = self.search_item_template.copy()
item['label'] = nh3.clean(search_item['titlesnippet'], tags=set())
item['id'] = search_item['title'].split(":")[1]
item['description'] = nh3.clean(search_item['snippet'], tags=set())
item['uri'] = OntProperty.id2uri(item['id'])
payload['items'].append(item)
item = SearchItem(
label=nh3.clean(search_item['titlesnippet'], tags=set()),
id=search_item['title'].split(":")[1],
description=nh3.clean(search_item['snippet'], tags=set()),
uri=OntProperty.id2uri(search_item['title'].split(":")[1])
)
payload_items.append(item)
payload = SearchPayload(payload_items)
return payload
2 changes: 1 addition & 1 deletion sand/models/ontology.py
Original file line number Diff line number Diff line change
Expand Up @@ -24,7 +24,7 @@ def readable_label(self):
def uri2id(uri: str) -> str:
"""Convert class URI to entity ID."""
raise NotImplementedError(
"The method is set when its store is initialized. Check the call order to ensure `OntClassAR`is called first"
"The method is set when its store is initialized. Check the call order to ensure `OntClassAR` is called first"
)

@staticmethod
Expand Down
23 changes: 23 additions & 0 deletions sand/models/search.py
Original file line number Diff line number Diff line change
@@ -0,0 +1,23 @@
from dataclasses import dataclass
from typing import List
from gena.serializer import get_dataclass_serializer


@dataclass
class SearchItem:
"""
Search Item dataclass to save the values of each search item in a search
"""
label: str
id: str
description: str
uri: str


@dataclass
class SearchPayload:
punith300i marked this conversation as resolved.
Show resolved Hide resolved
"""
Search Payload dataclass to hold several search items
"""
items: List[SearchItem]