refs.bib

@book{patankar,
   author =    {S. V. Patankar},
   title =     {Numerical Heat Transfer and Fluid Flow},
   year =      1980,
   publisher = {Taylor and Francis},
}

@book{versteegMalalasekera,
   author =    {H. K. Versteeg and W. Malalasekera},
   title =     {An Introduction to Computational Fluid Dynamics},
   year =      1995,
   publisher = {Longman Scientific and Technical},
}

@book{levelSetBook,
   author =    {J. A. Sethian},
   title =     {Level Set Methods and Fast Marching Methods},
   year =      1996,
   publisher = {Cambridge University Press},
}

@phdThesis{croftphd,
   author =  {T. N. Croft},
   title =   {Unstructured Mesh - Finite Volume Algorithms for Swirling,
              Turbulent Reacting Flows},
   school =  {University of Greenwich},
   year =    1998,
   url = {http://gala.gre.ac.uk/id/eprint/6371/}
}

@article{BoettingerReview:2002,
   author =  {W. J. Boettinger and J. A. Warren and C. Beckermann and A.
              Karma},
   title =   {Phase-field simulation of solidification},
   journal = {Annual Review of Materials Research},
   volume =  32,
   year =    2002,
   pages =   {163-194},
   doi =     {10.1146/annurev.matsci.32.101901.155803},
}

@article{ChenReview:2002,
   author =  {L. Q. Chen},
   title =   {Phase-field mdoels for microstructure evolution},
   journal = {Annual Review of Materials Research},
   volume =  32,
   year =    2002,
   pages =   {113-140},
   doi =     {10.1146/annurev.matsci.32.112001.132041},
}

@article{Mattiussi:1997,
   author =  {C. Mattiussi},
   title =   {An analysis of finite volume, finite element, and finite difference methods
              using some concepts from algebraic topology},
   journal = {Journal of Computational Physics},
   volume =  133,
   year =    1997,
   pages =   {289-309},
   url =     {http://lis.epfl.ch/publications/JCP1997.pdf}
}

@article{McFaddenReview:2002,
   author =  {G. B. McFadden},
   title =   {Phase-field models of solidification},
   journal = {Contemporary Mathematics},
   volume =  306,
   year =    2002,
   pages =   {107-145},
}

@book{NumericalRecipes,
   author =    {William H. Press and Saul A. Teukolsky and William T. Vetterling and Brian P. Flannery},
   title =     {Numerical Recipes in {C}: the Art of Scientific Computing},
   edition = {2nd},
   publisher = {Cambridge University Press},
   year =      1999,
}

@article{NIST:damascene:2001,
   author =  {D. Josell and D. Wheeler and W. H. Huber and T. P. Moffat},
   title =   {Superconformal Electrodeposition in Submicron Features},
   journal = {Physical Review Letters},
   volume =  87,
   number =  1,
   year =    2001,
   pages =   016102,
   doi =     {10.1103/PhysRevLett.87.016102},
}

@article{NIST:damascene:2003,
   author =  {D. Wheeler and D. Josell and T. P. Moffat},
   title =   {Modeling Superconformal Electrodeposition Using The Level Set Method},
   journal = {Journal of The Electrochemical Society},
   volume =  {150},
   number =  {5},
   year =    {2003},
   pages =   {C302-C310},
   doi =     {10.1149/1.1562598},
}

@article{NIST:damascene:2005,
   author =  {D. Josell and D. Wheeler and T. P. Moffat},
   title =   {Gold superfill in submicrometer trenches: Experiment and prediction},
   journal = {Journal of The Electrochemical Society},
   volume =  {153},
   number =  {1},
   year =    {2006},
   pages =   {C11-C18},
   doi =     {10.1149/1.2128765},
}

@article{NIST:leveler:2005,
   author =  {T. P. Moffat and D. Wheeler and S. K. Kim and D. Josell},
   title =   {Curvature enhanced adsorbate coverage model for electrodeposition},
   journal = {Journal of The Electrochemical Society},
   volume =  {153},
   number =  {2},
   year =    {2006},
   pages =   {C127-C132},
   doi =     {10.1149/1.2165580},
}

@article{Wheeler:1992,
   author = {A. A. Wheeler and W. J. Boettinger and G. B. {McF}adden},
   title = {Phase-field model for isothermal phase transitions in binary
            alloys},
   journal = {Physical Review A},
   volume =  45,
   number =  10,
   year =    1992,
   pages =   {7424--7439},
}

@article{CahnHilliardI,
	author = {John W. Cahn and John E. Hilliard},
	title = {Free energy of a nonuniform system. {I}. {I}nterfacial free energy},
	journal = {Journal of Chemical Physics},
	year = {1958},
	volume = {28},
	number = {2},
	pages = {258-267},
}

@article{CahnHilliardII,
	author = {John W. Cahn},
	title = {Free energy of a nonuniform system. {II}. {T}hermodynamic basis},
	journal = {Journal of Chemical Physics},
	year = {1959},
	volume = {30},
	number = {5},
	pages = {1121-1124},
}

@article{CahnHilliardIII,
	author = {John W. Cahn and John E. Hilliard},
	title = {Free energy of a nonuniform system. {III}. {N}ucleation in a two-component incompressible fluid},
	journal = {Journal of Chemical Physics},
	year = {1959},
	volume = {31},
	number = {3},
	pages = {688-699},
}

@article{Warren:1995,
   author =  {J. A. Warren and W. J. Boettinger},
   title =   {Prediction of Dendritic Growth and Microsegregation in a
              Binary Alloy using the Phase Field Method},
   journal = {Acta Metallurgica et Materialia},
   volume =  43,
   number =  2,
   year =    1995,
   pages =   {689-703},
}

@article{WarrenPolycrystal,
   author =  {James A. Warren and Ryo Kobayashi and Alexander E. Lobkovsky
              and W. Craig Carter},
   title =   {Extending Phase Field Models of Solidification to
              Polycrystalline Materials},
   journal = {Acta Materialia},
   volume =  51,
   number =  20,
   year =    2003,
   pages =   {6035-6058},
   doi =     {10.1016/S1359-6454(03)00388-4},
}

@article{ElPhFI,
   author =  {J. E. Guyer and W. J. Boettinger and J. A. Warren and G. B.
              McFadden},
   title =   {Phase field modeling of electrochemistry {I}: {E}quilibrium},
   journal = {Physical Review E},
   volume =  69,
   year =    2004,
   pages =   {021603},
   eprint =  {cond-mat/0308173},
   doi =     {10.1103/PhysRevE.69.021603},
}

@article{ElPhFII,
   author =  {J. E. Guyer and W. J. Boettinger and J. A. Warren and G. B.
              McFadden},
   title =   {Phase field modeling of electrochemistry {II}: {K}inetics},
   journal = {Physical Review E},
   volume =  69,
   year =    2004,
   pages =   {021604},
   eprint =  {cond-mat/0308179},
   doi =     {10.1103/PhysRevE.69.021604},
}

@manual{InstallingPythonModules,
   title = {Installing Python Modules},
   author = {Greg Ward},
   url = {http://docs.python.org/inst/}
}

@manual{PythonTutorial,
   title = {Python Tutorial},
   author = {Guido van Rossum},
   editor = {Fred L. Drake, Jr.},
   url = {http://docs.python.org/tut/}
}

@manual{PythonReference,
   title = {Python Reference Manual},
   author = {Guido van Rossum},
   editor = {Fred L. Drake, Jr.},
   url = {http://docs.python.org/ref/}
}

@book{DiveIntoPython,
   author =    {Mark Pilgrim},
   title =     {Dive Into Python},
   publisher = {Apress},
   year =      2004,
   isbn =      {1590593561},
   url =       {http://diveintopython.org},
}

@book{ProGit,
   author =    {Scott Chacon},
   title =     {Pro Git},
   publisher = {Apress},
   year =      2009,
   url = {http://git-scm.com/book}
}

@article{moffatInterface:2004,
   author =  {T. P. Moffat and D. Wheeler and D. Josell},
   title =   {Superfilling and the Curvature Enhanced Accelerator Coverage Mechanism},
   journal = {The Electrochemical Society, Interface},
   volume =  13,
   number =  4,
   year =    2004,
   pages =   {46-52},
   url =     {http://www.electrochem.org/publications/interface/winter2004/IF12-04-Pg46.pdf}
}

@book{ferziger,
   author =    {J. H. Ferziger and M. Peri\'{c}},
   title =     {Computational Methods for Fluid Dynamics},
   year =      1996,
   publisher = {Springer},
}

@article{rossow:2003,
   author =  {C.-C. Rossow},
   title =   {A blended pressure/density based method for the computation of incompressible and compressible flows},
   journal = {Journal of Computational Physics},
   volume =  185,
   number =  2,
   year =    2003,
   pages =   {375-398},
   doi =     {10.1016/S0021-9991(02)00059-1},
}

@Article{PhysRevE.82.051601,
  title = {Modeling the early stages of reactive wetting},
  author = {Wheeler, Daniel  and Warren, James A. and Boettinger, William J.},
  journal = {Physical Review E},
  volume = {82},
  number = {5},
  pages = {051601},
  numpages = {14},
  year = {2010},
  month = {Nov},
  doi = {10.1103/PhysRevE.82.051601},
  publisher = {American Physical Society}
}

@Article{Hangarter:2011p2795,
author = {C. M Hangarter and B. H Hamadani and J. E Guyer and H Xu and R Need and D Josell},
journal = {Journal of Applied Physics},
title = {Three dimensionally structured interdigitated back contact thin film heterojunction solar cells},
number = {7},
pages = {073514},
volume = {109},
year = {2011},
month = {Jan},
doi = {10.1063/1.3561487},
}

@Article{Saylor:2011p2794,
author = {David M Saylor and Jonathan E Guyer and Daniel Wheeler and James A Warren},
journal = {Acta Biomaterialia},
title = {Predicting microstructure development during casting of drug-eluting coatings},
number = {2},
pages = {604--613},
volume = {7},
year = {2011},
month = {Jan},
doi = {10.1016/j.actbio.2010.09.019},
}

@Article{Elder:2011p2811,
author = {K. R Elder and K Thornton and J. J Hoyt},
journal = {Philosophical Magagazine},
title = {The Kirkendall effect in the phase field crystal model},
number = {1},
pages = {151--164},
volume = {91},
year = {2011},
month = {Jan},
doi = {10.1080/14786435.2010.506427},
}