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Update subworkflow feature for NextFlow
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Bo Peng committed Nov 8, 2019
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4 changes: 2 additions & 2 deletions content/post/comparison.md
Expand Up @@ -202,7 +202,7 @@ The scripting language for workflow specification</td>
<tr class="result">
<th align="left">Subworkflow</th>
<td align="left">Yes</td>
<td align="left">No</td>
<td align="left">Yes</td>
<td align="left">Yes</td>
<td align="left">Yes</td>
<td align="left">Yes</td>
Expand All @@ -213,7 +213,7 @@ The scripting language for workflow specification</td>
<td>Support for executing subworkflows, potentially loaded from another pipeline file.
</td>
<td>SoS provides a <code>sos_run(name)</code> function to dynamically execute a subworkflow.</td>
<td>Nextflow does not seem to support the dynamic creation of subworkflows.</td>
<td>Nextflow supports subworkflows through the use of </a href="https://www.nextflow.io/docs/edge/dsl2.html#modules">submodules</a></td>
<td>Rules can be loaded from other text files. Subworkflows can be achieved by setting input of one workflow explicitly as output of another workflow.</td>
<td>Bpipe <code>run</code> keyword uses <code>+</code> operator to connect selected stages to pipeline. The <code>Load</code> statement can be used to import variable and pipeline stages from other files.</td>
<td>A CWL workflow can be used in place of a regular CWL step</td>
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6 changes: 3 additions & 3 deletions docs/post/comparison/index.html
Expand Up @@ -270,7 +270,7 @@ <h3 id="workflow-features">Workflow features</h3>
<tr class="result">
<th align="left">Subworkflow</th>
<td align="left">Yes</td>
<td align="left">No</td>
<td align="left">Yes</td>
<td align="left">Yes</td>
<td align="left">Yes</td>
<td align="left">Yes</td>
Expand All @@ -281,7 +281,7 @@ <h3 id="workflow-features">Workflow features</h3>
<td>Support for executing subworkflows, potentially loaded from another pipeline file.
</td>
<td>SoS provides a <code>sos_run(name)</code> function to dynamically execute a subworkflow.</td>
<td>Nextflow does not seem to support the dynamic creation of subworkflows.</td>
<td>Nextflow supports subworkflows through the use of </a href="https://www.nextflow.io/docs/edge/dsl2.html#modules">submodules</a></td>
<td>Rules can be loaded from other text files. Subworkflows can be achieved by setting input of one workflow explicitly as output of another workflow.</td>
<td>Bpipe <code>run</code> keyword uses <code>+</code> operator to connect selected stages to pipeline. The <code>Load</code> statement can be used to import variable and pipeline stages from other files.</td>
<td>A CWL workflow can be used in place of a regular CWL step</td>
Expand Down Expand Up @@ -355,7 +355,7 @@ <h3 id="workflow-features">Workflow features</h3>
</tr>

<tr class="result">
<th align="left">Built-in remote execution</th>
<th align="left">Buit-in remote execution</th>
<td align="left">Yes</td>
<td align="left">No</td>
<td align="left">No</td>
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