sagemathgh-36112: Upgrades: scipy 1.11 and dependencies

    
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This includes updates of `meson`, `meson_python`, `ninja_build`,
`pybind11`, `pyproject_metadata`, `pythran`, `gast`.

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Resolves sagemath#35703
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### ⌛ Dependencies

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- Depends on sagemath#35404 (merged here)
- Depends on sagemath#35810 (merged here)
- Depends on sagemath#35084 (merged here)


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URL: sagemath#36112
Reported by: Matthias Köppe
Reviewer(s): François Bissey

build/pkgs/cmake/checksums.ini

@@ -1,5 +1,5 @@
 tarball=cmake-VERSION.tar.gz
-sha1=256d6a57a57fa6ceaacd6a2daf708baefd33850c
-md5=226dd564164372f9f7d1e21e38e6e8c5
-cksum=2080281918
+sha1=3e9b980bfb16974f57ca02b5e2b403a2ef2d4eca
+md5=7228f5fcc8a858fdeac27e29bda0c144
+cksum=2027526722
 upstream_url=https://github.com/Kitware/CMake/releases/download/vVERSION/cmake-VERSION.tar.gz

build/pkgs/cmake/package-version.txt

@@ -1 +1 @@
-3.24.3
+3.27.3

build/pkgs/gast/checksums.ini

@@ -1,5 +1,5 @@
 tarball=gast-VERSION.tar.gz
-sha1=a84811eedebc5bca94b4eae978aab5f2c805b106
-md5=fdff900805e03e9dd76d377eb4cbaed7
-cksum=387443419
+sha1=6c113cf8d33cc654d33210335103485ab41d3dbb
+md5=907c689e3fdbc7a48cc010e665195baa
+cksum=218846575
 upstream_url=https://pypi.io/packages/source/g/gast/gast-VERSION.tar.gz

build/pkgs/gast/package-version.txt

@@ -1 +1 @@
-0.5.3
+0.5.4

build/pkgs/meson/checksums.ini

@@ -1,5 +1,5 @@
 tarball=meson-VERSION.tar.gz
-sha1=a2d102eb6a37307c9b67283e9764ed57cf286223
-md5=843ba549bb2a199d9e04092116a7e749
-cksum=2108460988
+sha1=087da0ecbc065bb40361ba683b55c20cb42a948a
+md5=e3cc846536189aacd7d01858a45ca9af
+cksum=4011973902
 upstream_url=https://pypi.io/packages/source/m/meson/meson-VERSION.tar.gz

build/pkgs/meson/package-version.txt

@@ -1 +1 @@
-1.0.1
+1.2.1

build/pkgs/meson/spkg-configure.m4

@@ -1,10 +1,11 @@
 SAGE_SPKG_CONFIGURE(
     [meson], [
-        AC_CACHE_CHECK([for meson >= 0.64], [ac_cv_path_MESON], [
+        dnl scipy 1.11.2 needs meson >= 1.1.0
+        AC_CACHE_CHECK([for meson >= 1.1.0], [ac_cv_path_MESON], [
         AC_PATH_PROGS_FEATURE_CHECK([MESON], [meson], [
             meson_version=`$ac_path_MESON --version 2>&1`
             AS_IF([test -n "$meson_version"], [
-                AX_COMPARE_VERSION([$meson_version], [ge], [0.64], [
+                AX_COMPARE_VERSION([$meson_version], [ge], [1.1.0], [
                     ac_cv_path_MESON="$ac_path_MESON"
                     ac_path_MESON_found=:
                 ])

build/pkgs/meson_python/checksums.ini

@@ -1,5 +1,5 @@
 tarball=meson_python-VERSION.tar.gz
-sha1=bdaf002dc1ef314c32e2be76f3b2872f1282c4cc
-md5=39be4f0b7f036e1d5db4a76fdb031355
-cksum=2636510839
+sha1=e52e84fcd84ea7dd8c11f464390786686a1be8e6
+md5=0db4483e30df43dbd465254be9c7db8a
+cksum=1452585711
 upstream_url=https://pypi.io/packages/source/m/meson_python/meson_python-VERSION.tar.gz

build/pkgs/meson_python/package-version.txt

@@ -1 +1 @@
-0.12.1
+0.13.2

build/pkgs/ninja_build/checksums.ini

@@ -1,5 +1,5 @@
 tarball=ninja_build-VERSION.tar.gz
-sha1=f8c9279bdd4efc63b1a6be3b8c5a5031699af9ac
-md5=7d1a1a2f5cdc06795b3054df5c17d5ef
-cksum=3142198237
+sha1=938723cdfc7a6f7c8f84c83b9a2cecdf1e5e1ad3
+md5=32151c08211d7ca3c1d832064f6939b0
+cksum=4040304461
 upstream_url=https://github.com/ninja-build/ninja/archive/refs/tags/vVERSION.tar.gz

build/pkgs/ninja_build/package-version.txt

@@ -1 +1 @@
-1.11.0
+1.11.1

build/pkgs/pybind11/checksums.ini

@@ -1,5 +1,5 @@
 tarball=pybind11-VERSION.tar.gz
-sha1=d0e6e22c2ce36fad4bb60dbac4d6d498ceb464df
-md5=0b181dbb44c3cc632e724cef5081cae1
-cksum=4287838207
+sha1=3c75333a9056f0be18eb612803cd46a2bb0c87fc
+md5=67c58224e41c442e47fa84e7789c2c39
+cksum=419587142
 upstream_url=https://pypi.io/packages/source/p/pybind11/pybind11-VERSION.tar.gz

build/pkgs/pybind11/package-version.txt

@@ -1 +1 @@
-2.10.1
+2.11.1

build/pkgs/pyproject_metadata/checksums.ini

@@ -1,5 +1,5 @@
 tarball=pyproject-metadata-VERSION.tar.gz
-sha1=c2b7679b1e56a341aa00c186c0d1a6bbd7bd5c2c
-md5=e13b11cb723da96f8397addddca963cc
-cksum=2246727402
+sha1=41fba5c33917d77b9364fadb76e590e86789634d
+md5=ca5e9527cff96153a976e14530b53746
+cksum=2053869519
 upstream_url=https://pypi.io/packages/source/p/pyproject_metadata/pyproject-metadata-VERSION.tar.gz

build/pkgs/pyproject_metadata/package-version.txt

@@ -1 +1 @@
-0.6.1
+0.7.1

build/pkgs/pythran/checksums.ini

@@ -1,5 +1,5 @@
 tarball=pythran-VERSION.tar.gz
-sha1=71bc7c868cf011d184a013211f4195d8f9c606a2
-md5=168c31e8d108f26440b663b44cd99379
-cksum=2086161839
+sha1=dd675e9ccc93379b529687328ca558d5617eb1c6
+md5=3090288af50566af75cb058d1878aaad
+cksum=3968085663
 upstream_url=https://pypi.io/packages/source/p/pythran/pythran-VERSION.tar.gz

build/pkgs/pythran/package-version.txt

@@ -1 +1 @@
-0.12.1
+0.13.1

build/pkgs/sagelib/dependencies

@@ -1,4 +1,4 @@
-FORCE $(SCRIPTS) arb boost_cropped $(BLAS) brial cliquer cypari cysignals cython ecl eclib ecm flint libgd gap giac givaro glpk gmpy2 gsl iml importlib_metadata importlib_resources jinja2 jupyter_core lcalc lrcalc_python libbraiding libhomfly libpng linbox m4ri m4rie memory_allocator mpc mpfi mpfr $(MP_LIBRARY) ntl numpy pari pip pkgconfig planarity ppl pplpy primesieve primecount primecountpy pycygwin $(PYTHON) requests rw sage_conf singular symmetrica typing_extensions $(PCFILES) | $(PYTHON_TOOLCHAIN) sage_setup
+FORCE $(SCRIPTS) arb boost_cropped $(BLAS) brial cliquer cypari cysignals cython ecl eclib ecm flint libgd gap giac givaro glpk gmpy2 gsl iml importlib_metadata importlib_resources jinja2 jupyter_core lcalc lrcalc_python libbraiding libhomfly libpng linbox m4ri m4rie memory_allocator mpc mpfi mpfr $(MP_LIBRARY) ntl numpy pari pip pkgconfig planarity ppl pplpy primesieve primecount primecountpy pycygwin $(PYTHON) requests rw sage_conf singular symmetrica typing_extensions $(PCFILES) | $(PYTHON_TOOLCHAIN) sage_setup pythran
 
 ----------
 All lines of this file are ignored except the first.

build/pkgs/scipy/checksums.ini

@@ -1,5 +1,5 @@
 tarball=scipy-VERSION.tar.gz
-sha1=ff83163396a70276c0441b541befc485b471b27b
-md5=de3db61d840456634ba37f2b5816e049
-cksum=3826133895
+sha1=856f8ac8498751b72d678ef64b88e436d04a957d
+md5=27baf613b6cf3f9600a05161f132151c
+cksum=1656738318
 upstream_url=https://pypi.io/packages/source/s/scipy/scipy-VERSION.tar.gz

build/pkgs/scipy/install-requires.txt

@@ -4,4 +4,4 @@
 # deprecations cannot be introduced in micro releases.
 # SciPy devs wait "at least 6 months", "in practice two (minor) releases"
 # from deprecation to removal of a feature.
-scipy >=1.5, <1.11
+scipy >=1.5, <1.12

build/pkgs/scipy/package-version.txt

@@ -1 +1 @@
-1.10.1
+1.11.2