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removed unused badges.
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Venelin Mitov committed Dec 7, 2019
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2 changes: 0 additions & 2 deletions README.Rmd
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Expand Up @@ -40,8 +40,6 @@ knitr::opts_chunk$set(
```

[![Travis build status](https://travis-ci.org/venelin/SPLITT.svg?branch=master)](https://travis-ci.org/venelin/SPLITT)
[![CRAN_Status_Badge](http://www.r-pkg.org/badges/version/SPLITT?color=blue)](http://cran.rstudio.com/package=SPLITT)
[![Downloads](http://cranlogs.r-pkg.org/badges/SPLITT?color=blue)](http://cran.rstudio.com/package=SPLITT)
[![DOI](https://zenodo.org/badge/159803456.svg)](https://zenodo.org/badge/latestdoi/159803456)

# SPLITT: Serial and Parallel LIneage Traversal of Trees
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4 changes: 1 addition & 3 deletions README.md
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Expand Up @@ -29,8 +29,6 @@

[![Travis build
status](https://travis-ci.org/venelin/SPLITT.svg?branch=master)](https://travis-ci.org/venelin/SPLITT)
[![CRAN\_Status\_Badge](http://www.r-pkg.org/badges/version/SPLITT?color=blue)](http://cran.rstudio.com/package=SPLITT)
[![Downloads](http://cranlogs.r-pkg.org/badges/SPLITT?color=blue)](http://cran.rstudio.com/package=SPLITT)
[![DOI](https://zenodo.org/badge/159803456.svg)](https://zenodo.org/badge/latestdoi/159803456)

# SPLITT: Serial and Parallel LIneage Traversal of Trees
Expand Down Expand Up @@ -109,7 +107,7 @@ Phylogenetic Comparative Models: the SPLITT C++ Library. bioRxiv,

The SPLITT R-package uses the following 3rd party R-packages:

- For calling C++ from R: Rcpp v1.0.1 (Eddelbuettel et al. 2018);
- For calling C++ from R: Rcpp v1.0.2 (Eddelbuettel et al. 2018);
- For tree processing in R: ape v5.3 (Paradis et al. 2018);
- For cloning and manipulating git repositories: git2r v0.26.1 (Csardi
et al. 2018);
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33 changes: 23 additions & 10 deletions docs/index.html
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2 changes: 1 addition & 1 deletion docs/pkgdown.yml
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@@ -1,4 +1,4 @@
pandoc: 1.13.1
pandoc: 2.3.1
pkgdown: 1.3.0
pkgdown_sha: ~
articles:
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138 changes: 0 additions & 138 deletions docs/sitemap.xml
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Expand Up @@ -9,144 +9,6 @@
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14 changes: 7 additions & 7 deletions vignettes/REFERENCES-R.bib
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@@ -1,10 +1,3 @@
@Manual{R-Rcpp,
title = {Rcpp: Seamless R and C++ Integration},
author = {Dirk Eddelbuettel and Romain Francois and JJ Allaire and Kevin Ushey and Qiang Kou and Nathan Russell and Douglas Bates and John Chambers},
year = {2019},
note = {R package version 1.0.1},
url = {https://CRAN.R-project.org/package=Rcpp},
}
@Manual{R-ape,
title = {ape: Analyses of Phylogenetics and Evolution},
author = {Emmanuel Paradis and Simon Blomberg and Ben Bolker and Joseph Brown and Julien Claude and Hoa Sien Cuong and Richard Desper and Gilles Didier and Benoit Durand and Julien Dutheil and RJ Ewing and Olivier Gascuel and Thomas Guillerme and Christoph Heibl and Anthony Ives and Bradley Jones and Franz Krah and Daniel Lawson and Vincent Lefort and Pierre Legendre and Jim Lemon and Eric Marcon and Rosemary McCloskey and Johan Nylander and Rainer Opgen-Rhein and Andrei-Alin Popescu and Manuela Royer-Carenzi and Klaus Schliep and Korbinian Strimmer and Damien {de Vienne}},
Expand All @@ -26,6 +19,13 @@ @Manual{R-pkgdown
note = {R package version 1.3.0},
url = {https://CRAN.R-project.org/package=pkgdown},
}
@Manual{R-Rcpp,
title = {Rcpp: Seamless R and C++ Integration},
author = {Dirk Eddelbuettel and Romain Francois and JJ Allaire and Kevin Ushey and Qiang Kou and Nathan Russell and Douglas Bates and John Chambers},
year = {2019},
note = {R package version 1.0.2},
url = {https://CRAN.R-project.org/package=Rcpp},
}
@Manual{R-roxygen2,
title = {roxygen2: In-Line Documentation for R},
author = {Hadley Wickham and Peter Danenberg and Manuel Eugster},
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