Merge pull request #201 from waveygang/log-length-plane-sweep

plane sweep using log block length times identity as score
waveygang · Nov 3, 2023 · bcfbc14 · bcfbc14
2 parents 67ab187 + b73e337
commit bcfbc14
Showing 1 changed file with 2 additions and 2 deletions.
diff --git a/src/map/include/filter.hpp b/src/map/include/filter.hpp
@@ -41,7 +41,7 @@ namespace skch
 
         Helper(MappingResultsVector_t &v) : vec(v) {}
 
-        double get_score(const int x) const {return vec[x].nucIdentity; }
+        double get_score(const int x) const {return vec[x].nucIdentity * log(vec[x].blockLength) ; }
 
         //Greater than comparison by score and begin position
         //used to define order in BST
@@ -254,7 +254,7 @@ namespace skch
 
         Helper(MappingResultsVector_t &v) : vec(v) {}
 
-        double get_score(const int x) const {return vec[x].nucIdentity; }
+        double get_score(const int x) const {return vec[x].nucIdentity * log(vec[x].blockLength) ; }
 
         //Greater than comparison by score and begin position
         //used to define order in BST