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Releases: weigertlab/spotiflow

0.4.2

06 Sep 15:03
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  • Allow storing/loading pretrained models and datasets either via the env var SPOTIFLOW_CACHE_DIR or directly through the cache_dir argument (see #15).
  • Bump CI actions to newer versions

Bugfix: setuptools building

29 Aug 14:28
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  • Fix build failing due to setuptools error
  • Assess PyTorch warning (#14)

Native 3D spot prediction

17 Aug 11:05
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  • Added 3D variant of UNet
  • Added 3D SpotsDataset handler
  • Added pre-trained 3D models
  • Trilinear interpolation to retrieve intensity

0.3.3

09 Jul 09:18
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What's Changed

  • Extend CLI parameters and Add Github Actions for Docker . by @migueLib in #11
  • CLI handling of hidden files (#12)

New Contributors

Full Changelog: 0.3.2...0.3.3

0.3.2

17 Jun 15:48
58b1e99
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Preparing upload to conda-forge by removing an unnecessary breaking dependency

0.3.1

17 Jun 10:02
84e9d74
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Pin NumPy to <2.*

0.3.0

17 Mar 16:19
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Return predicted spot intensities

0.2.0

08 Feb 15:35
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Added CLI option and minor bugfixes

What's Changed

  • Fixed typo by @ajinkya-kulkarni in #1
  • Added CLI to predict (spotiflow-predict)
  • Minor bugfixes in Spotiflow.predict API

New Contributors

Full Changelog: 0.1.0...0.2.0

First release

02 Feb 18:27
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Initial release