Ecoli_PTMs

MODa_Setup:

Files and scripts for running MODa on the MURI/AG3C glucose time course proteomics data (raw data deposited with the Proteo-meXchange Consortium via the PRIDE partner repository (accession PXD002140))

MODa_Output:

Result files from MODa runs

Analysis:

Code (in the form of Jupyter notebooks) and input data (in Analysis/data/inputs) for re-creating the figures, tables, and Additional Files in the manuscript.