Skip to content
master
Switch branches/tags
Code

Latest commit

 

Git stats

Files

Permalink
Failed to load latest commit information.
Type
Name
Latest commit message
Commit time
 
 
 
 
 
 
 
 
 
 
 
 

Introduction

Tools for conducting simulations of Markov processes on various various graph structures, with particular attention given to calculation of thermodynamic quantities like entropy production rate.

Transition matrix generators for common graph types (Cayley tree, stochastic "small world")

Tools for working with transition matrices (reordering states, renormalizing, biasing)

Tools for generating and sampling trajectories in a Markov chain and quantifying thermodynamic quantities like mutual information and heat generation.

Tools for visualizing Markov matrices using the NetworkX python graph theory library

Dependencies

networkx

numpy

matplotlib

Examples

About

Tools for analyzing Markov models using statistical physics and graph theory

Topics

Resources

License

Releases

No releases published

Packages

No packages published

Languages