[Refactor] Improve the performance of temporal group averaging #1914
Workflow file for this run
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| name: CI/CD Build Workflow | |
| on: | |
| push: | |
| branches: [main] | |
| pull_request: | |
| branches: [main] | |
| workflow_dispatch: | |
| env: | |
| CANCEL_OTHERS: true | |
| PATHS_IGNORE: '["**/README.rst", "**/AUTHORS.rst", "**/CODE_OF_CONDUCT.rst", "**/HISTORY.rst", "**/CONTRIBUTING.rst", "**/docs/**", "**/ISSUE_TEMPLATE/**", "**/pull_request_template.md", "**/.vscode/**"]' | |
| jobs: | |
| skip-duplicate-actions: | |
| runs-on: ubuntu-latest | |
| outputs: | |
| should_skip: ${{ steps.skip_check.outputs.should_skip }} | |
| paths_result: ${{ steps.skip_check.outputs.paths_result }} | |
| steps: | |
| - id: skip_check | |
| uses: fkirc/skip-duplicate-actions@v5 | |
| with: | |
| cancel_others: ${{ env.CANCEL_OTHERS }} | |
| paths_ignore: ${{ env.PATHS_IGNORE }} | |
| do_not_skip: '["push", "workflow_dispatch"]' | |
| pre-commit-hooks: | |
| needs: skip-duplicate-actions | |
| if: needs.skip-duplicate-actions.outputs.should_skip != 'true' | |
| runs-on: ubuntu-latest | |
| timeout-minutes: 3 | |
| steps: | |
| - name: Checkout Code Repository | |
| uses: actions/checkout@v3 | |
| - name: Set up Python 3.10 | |
| uses: actions/setup-python@v3 | |
| with: | |
| python-version: "3.10" | |
| - name: Install and Run Pre-commit | |
| uses: pre-commit/action@v3.0.0 | |
| build: | |
| needs: skip-duplicate-actions | |
| if: needs.skip-duplicate-actions.outputs.should_skip != 'true' | |
| name: Build (Python ${{ matrix.python-version }}) | |
| runs-on: "ubuntu-latest" | |
| timeout-minutes: 10 | |
| defaults: | |
| run: | |
| shell: bash -l {0} | |
| strategy: | |
| matrix: | |
| python-version: ["3.9", "3.10", "3.11"] | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: Set up Conda Environment | |
| uses: conda-incubator/setup-miniconda@v2 | |
| with: | |
| miniforge-variant: Mambaforge | |
| miniforge-version: latest | |
| activate-environment: "xcdat_ci" | |
| use-mamba: true | |
| mamba-version: "*" | |
| channel-priority: strict | |
| auto-update-conda: true | |
| python-version: ${{ matrix.python-version }} | |
| # Refresh the cache every 24 hours to avoid inconsistencies of package versions | |
| # between the CI pipeline and local installations. | |
| - id: get-date | |
| name: Get Date | |
| run: echo "today=$(/bin/date -u '+%Y%m%d')" >> $GITHUB_OUTPUT | |
| shell: bash | |
| - id: cache | |
| name: Cache Conda env | |
| uses: actions/cache@v3 | |
| with: | |
| path: ${{ env.CONDA }}/envs | |
| key: | |
| conda-${{ runner.os }}-${{ runner.arch }}-${{ matrix.python-version }}-${{ | |
| steps.get-date.outputs.today }}-${{hashFiles('conda-env/ci.yml') }}-${{ env.CACHE_NUMBER}} | |
| env: | |
| # Increase this value to reset cache if conda-env/ci.yml has not changed in the workflow | |
| CACHE_NUMBER: 0 | |
| - if: steps.cache.outputs.cache-hit != 'true' | |
| name: Update environment | |
| run: | | |
| mamba env update -n xcdat_ci -f conda-env/ci.yml | |
| # Make sure the Python version in the env matches the current matrix version. | |
| # Make sure numpy is not > 2.0. | |
| mamba install -c conda-forge python=${{ matrix.python-version }} "numpy>=1.23.0,<2.0" | |
| - name: Install xcdat | |
| # Source: https://github.com/conda/conda-build/issues/4251#issuecomment-1053460542 | |
| run: | | |
| python -m pip install --no-build-isolation --no-deps -e . | |
| - name: Run Tests | |
| run: | | |
| pytest | |
| - name: Upload Coverage Report | |
| uses: codecov/codecov-action@v4 | |
| with: | |
| file: "tests_coverage_reports/coverage.xml" | |
| fail_ci_if_error: true | |
| token: ${{ secrets.CODECOV_TOKEN }} | |
| # `build-result` is a workaround to skipped matrix jobs in `build` not being considered "successful", | |
| # which can block PR merges if matrix jobs are required status checks. | |
| # More info: https://github.com/fkirc/skip-duplicate-actions#how-to-use-skip-check-with-required-matrix-jobs | |
| build-result: | |
| name: Build Result | |
| if: needs.skip-duplicate-actions.outputs.should_skip != 'true' && always() | |
| runs-on: ubuntu-latest | |
| needs: | |
| - skip-duplicate-actions | |
| - build | |
| steps: | |
| - name: Mark result as failed | |
| if: needs.build.result != 'success' | |
| run: exit 1 |