Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

replace the deprecated provision-with-micromamba with setup-micromamba #258

Merged
merged 8 commits into from
Aug 31, 2023
Merged
Show file tree
Hide file tree
Changes from all commits
Commits
File filter

Filter by extension

Filter by extension


Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
7 changes: 4 additions & 3 deletions .github/workflows/benchmarks.yml
Original file line number Diff line number Diff line change
Expand Up @@ -22,12 +22,13 @@ jobs:
fetch-depth: 0

- name: Set up conda environment
uses: mamba-org/provision-with-micromamba@v15
uses: mamba-org/setup-micromamba@v1
with:
environment-file: ci/environment.yml
environment-name: flox-tests
cache-env: true
# extra-specs: |
init-shell: bash
cache-environment: true
# create-args: |
# python="${{ matrix.python-version }}"

# - name: Setup some dependencies
Expand Down
18 changes: 10 additions & 8 deletions .github/workflows/ci-additional.yaml
Original file line number Diff line number Diff line change
Expand Up @@ -53,14 +53,15 @@ jobs:
echo "TODAY=$(date +'%Y-%m-%d')" >> $GITHUB_ENV

- name: Setup micromamba
uses: mamba-org/provision-with-micromamba@v15
uses: mamba-org/setup-micromamba@v1
with:
environment-file: ${{env.CONDA_ENV_FILE}}
environment-name: flox-tests
extra-specs: |
python=${{env.PYTHON_VERSION}}
cache-env: true
init-shell: bash
cache-environment: true
cache-env-key: "${{runner.os}}-${{runner.arch}}-py${{env.PYTHON_VERSION}}-${{env.TODAY}}-${{hashFiles(env.CONDA_ENV_FILE)}}"
create-args: |
python=${{ env.PYTHON_VERSION }}

- name: Install flox
run: |
Expand Down Expand Up @@ -102,14 +103,15 @@ jobs:
run: |
echo "TODAY=$(date +'%Y-%m-%d')" >> $GITHUB_ENV
- name: Setup micromamba
uses: mamba-org/provision-with-micromamba@v15
uses: mamba-org/setup-micromamba@v1
with:
environment-file: ${{env.CONDA_ENV_FILE}}
environment-name: flox-tests
extra-specs: |
python=${{env.PYTHON_VERSION}}
cache-env: true
init-shell: bash
cache-environment: true
cache-env-key: "${{runner.os}}-${{runner.arch}}-py${{env.PYTHON_VERSION}}-${{env.TODAY}}-${{hashFiles(env.CONDA_ENV_FILE)}}"
create-args: |
python=${{ env.PYTHON_VERSION }}
- name: Install flox
run: |
python -m pip install --no-deps -e .
Expand Down
29 changes: 16 additions & 13 deletions .github/workflows/ci.yaml
Original file line number Diff line number Diff line change
Expand Up @@ -34,13 +34,14 @@ jobs:
run: |
echo "PYTHON_VERSION=${{ matrix.python-version }}" >> $GITHUB_ENV
- name: Set up conda environment
uses: mamba-org/provision-with-micromamba@v15
uses: mamba-org/setup-micromamba@v1
with:
environment-file: ci/environment.yml
environment-name: flox-tests
cache-env: true
extra-specs: |
python="${{ matrix.python-version }}"
init-shell: bash
cache-environment: true
create-args: |
python=${{ matrix.python-version }}
- name: Install flox
run: |
python -m pip install --no-deps -e .
Expand Down Expand Up @@ -77,13 +78,14 @@ jobs:
with:
fetch-depth: 0 # Fetch all history for all branches and tags.
- name: Set up conda environment
uses: mamba-org/provision-with-micromamba@v15
uses: mamba-org/setup-micromamba@v1
with:
environment-file: ci/${{ matrix.env }}.yml
environment-file: ci/environment.yml
environment-name: flox-tests
cache-env: true
extra-specs: |
python="${{ matrix.python-version }}"
init-shell: bash
cache-environment: true
create-args: |
python=${{ matrix.python-version }}
- name: Install flox
run: |
python -m pip install --no-deps -e .
Expand Down Expand Up @@ -111,13 +113,14 @@ jobs:
repository: 'pydata/xarray'
fetch-depth: 0 # Fetch all history for all branches and tags.
- name: Set up conda environment
uses: mamba-org/provision-with-micromamba@v15
uses: mamba-org/setup-micromamba@v1
with:
environment-file: ci/requirements/environment.yml
environment-name: xarray-tests
cache-env: true
extra-specs: |
python="3.10"
init-shell: bash
cache-environment: true
create-args: |
python=3.10
- name: Install xarray
run: |
python -m pip install --no-deps .
Expand Down
8 changes: 5 additions & 3 deletions .github/workflows/upstream-dev-ci.yaml
Original file line number Diff line number Diff line change
Expand Up @@ -35,12 +35,14 @@ jobs:
run: |
echo "PYTHON_VERSION=${{ matrix.python-version }}" >> $GITHUB_ENV
- name: Set up conda environment
uses: mamba-org/provision-with-micromamba@v15
uses: mamba-org/setup-micromamba@v1
with:
environment-file: ci/upstream-dev-env.yml
environment-name: flox-tests
extra-specs: |
python="${{ matrix.python-version }}"
init-shell: bash
cache-environment: true
create-args: >-
python=${{ matrix.python-version }}
pytest-reportlog
- name: Install flox
run: |
Expand Down
2 changes: 1 addition & 1 deletion flox/core.py
Original file line number Diff line number Diff line change
Expand Up @@ -1622,7 +1622,7 @@ def _convert_expected_groups_to_index(
out.append(ex)
elif ex is not None:
if isbin_:
out.append(pd.IntervalIndex.from_breaks(ex)) # type: ignore [arg-type] # TODO: what do we want here?
out.append(pd.IntervalIndex.from_breaks(ex))
else:
if sort:
ex = np.sort(ex)
Expand Down
Loading