Importer: Remove requirement that precursor scan number is prev ms1

Now allow other ms1 between precursor scan number and scan that references that precursor scan number
yeastrc · Jun 8, 2018 · 507b221 · 507b221
1 parent 4caecb6
commit 507b221
Showing 1 changed file with 5 additions and 5 deletions.
diff --git a/.../org/yeastrc/proxl/import_xml_to_db/spectrum/mzml_mzxml/reader/MzMl_MzXml_FileReader.java b/.../org/yeastrc/proxl/import_xml_to_db/spectrum/mzml_mzxml/reader/MzMl_MzXml_FileReader.java
@@ -127,11 +127,11 @@ public String getFileName() {
         else if(header.getMsLevel() > 1) {
 
             if(header.getPrecursorScanNum() > 0) {
-                if(header.getPrecursorScanNum() != this.lastMs1ScanNumber) {
-                    throw new DataProviderException("last MS1 scan: "+this.lastMs1ScanNumber+
-                            " is not the same as precursor scan number: "+header.getPrecursorScanNum()+
-                            " for scan: "+header.getNum());
-                }
+//                if(header.getPrecursorScanNum() != this.lastMs1ScanNumber) {
+//                    throw new DataProviderException("last MS1 scan: "+this.lastMs1ScanNumber+
+//                            " is not the same as precursor scan number: "+header.getPrecursorScanNum()+
+//                            " for scan: "+header.getNum());
+//                }
                 mScan.setPrecursorScanNum(header.getPrecursorScanNum());
             }
             else {