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Update README and docs for pypi package
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jonls committed May 21, 2015
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5 changes: 4 additions & 1 deletion README.rst
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Expand Up @@ -7,6 +7,9 @@ PSAMM metabolic modeling tools
.. image:: https://readthedocs.org/projects/psamm/badge/?version=latest
:alt: Documentation Status
:target: https://readthedocs.org/projects/psamm/?badge=latest
.. image:: https://badge.fury.io/py/psamm.svg
:alt: Package Status
:target: https://pypi.python.org/pypi/psamm

Tools related to metabolic modeling, reconstruction, data parsing and
formatting, consistency checking, automatic gap filling, and model simulations.
Expand All @@ -25,7 +28,7 @@ Use `pip` to install (it is recommended to use a Virtualenv_):

.. code:: shell
$ pip install git+https://github.com/zhanglab/psamm.git
$ pip install psamm
The `psamm-import` tool is developed in `a separate repository`_. After
installing PSAMM the `psamm-import` tool can be installed using:
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2 changes: 1 addition & 1 deletion docs/install.rst
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Expand Up @@ -7,7 +7,7 @@ The Python module can be installed using ``pip``. This will typically require

.. code-block:: shell
$ pip install git+https://github.com/zhanglab/psamm.git
$ pip install psamm
Another option that does not require *root* permissions is to use a
`Virtualenv`_. First set up a new environment in your project directory and
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