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Error in data.frame #24
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Hi Lars, When you run giremi, you can see the meanMI and sdMI in the screen, could Best, 2016-10-10 1:41 GMT-07:00 Lsteenhuis notifications@github.com:
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Hey Qing, Thanks for the quick reaction, my meanMI and sdMI are:
It caught my eye that these values are really low. Thanks in advance, Lars |
Hi Lars, Yes, I think your SNP list is not pure, there must be many sequencing Best, 2016-10-11 7:38 GMT-07:00 Lsteenhuis notifications@github.com:
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Hey Qing, Alright I will play around some more, thanks for the help! Cheers, Lars |
Dear Qing,
I have been trying to get giremi running over the past few weeks, and used the issues on this page to try to solve my problems.
But now I have the following error:
I have seen you suggest to remove the homozygous SNV's from the list, I think I have done this correctly but the error persists.
The output files and my list of SNV's are attached and I would greatly appreciate it if you could take some of your time to help me figure out this problem.
giremi_out.txt
giremi_out.vcf.Rout.txt
test_snps.txt
Cheers,
Lars
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