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Issues: blachlylab/dhtslib

Rebranding (name change)
#102 opened Aug 31, 2021 by jblachly
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23 Open 83 Closed
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Issues list

GFF3Reader can't handle with comment lines in middle of file bug Something isn't working
#140 opened Jan 7, 2023 by charlesgregory
@charlesgregory
VCFRecord.filter doesn't return correct set of filters bug Something isn't working
#139 opened Aug 30, 2022 by charlesgregory
@charlesgregory
2
Rework reader/writers to use HtslibIterator and HtslibFile across dhtslib enhancement New feature or request
#133 opened Feb 23, 2022 by charlesgregory
@charlesgregory
Update bindings to htslib 1.15 enhancement New feature or request
#132 opened Feb 23, 2022 by charlesgregory v0.14.2+htslib-1.15
bam_aux_update_int fails non-deterministically
#127 opened Dec 31, 2021 by charlesgregory
Version check warning enhancement New feature or request question Further information is requested
#120 opened Oct 22, 2021 by charlesgregory
1
Update bindings to htslib 1.14 enhancement New feature or request
#118 opened Oct 22, 2021 by charlesgregory v0.14.1+htslib-1.14
@charlesgregory
Get valid coordinates from Interval enhancement New feature or request
#115 opened Oct 1, 2021 by charlesgregory v0.14.1+htslib-1.14
@charlesgregory
1
GFF3 coordinate offsets don't make sense bug Something isn't working
#112 opened Oct 1, 2021 by jblachly v0.14.1+htslib-1.14
@charlesgregory
3
Convert integration unit tests to true unit tests
#106 opened Sep 7, 2021 by charlesgregory
Rebranding (name change) help wanted Extra attention is needed
#102 opened Aug 31, 2021 by jblachly
@jblachly @charlesgregory
4
Interval (and Coordinate) should probably include contig name
#101 opened Aug 31, 2021 by jblachly
@charlesgregory
Functional style Optional and Result return types enhancement New feature or request
#99 opened Aug 25, 2021 by jblachly
htslib unittests enhancement New feature or request question Further information is requested
#97 opened Aug 25, 2021 by charlesgregory
1
rust-htslib read_pos enhancement New feature or request question Further information is requested
#91 opened Aug 3, 2021 by jblachly
2
Documentation: HTML output and github pages/hosted documentation good first issue Good for newcomers help wanted Extra attention is needed
#67 opened Apr 21, 2021 by jblachly
4
Areas for performance improvement enhancement New feature or request help wanted Extra attention is needed question Further information is requested
#65 opened Apr 21, 2021 by charlesgregory
2
Separate unit tests and integration tests testing
#60 opened Mar 8, 2021 by jblachly
@jblachly
2
Centralized (compiler) warnings enhancement New feature or request help wanted Extra attention is needed question Further information is requested
#56 opened Dec 22, 2020 by charlesgregory
Windows compatibility
#38 opened Feb 22, 2020 by charlesgregory
7
tagvalue null pointer bug Something isn't working
#33 opened Nov 2, 2019 by jblachly
@charlesgregory
8
Documentation: source level documentation enhancement New feature or request good first issue Good for newcomers help wanted Extra attention is needed
#21 opened Mar 9, 2019 by jblachly
1
Expose pileup in dhtslib.sam.SAMFile enhancement New feature or request
#8 opened Jan 22, 2019 by jblachly
@jblachly
1
ProTip! Adding no:label will show everything without a label.