Add total, stranded RNA-Seq for 8 samples

[jharenza]

What data file(s) does this issue pertain to?

pbta-star-log-final.tar.gz
pbta-star-log-manifest.tsv
pbta-mend-qc-manifest.tsv
pbta-mend-qc-results.tar.gz
pbta-isoform-counts-rsem-expected_count.polya.rds
pbta-isoform-counts-rsem-expected_count.stranded.rds
pbta-isoform-expression-rsem-tpm.polya.rds
pbta-isoform-expression-rsem-tpm.stranded.rds
pbta-fusion-arriba.tsv.gz
pbta-fusion-putative-oncogenic.tsv
pbta-fusion-recurrently-fused-genes-byhistology.tsv
pbta-fusion-recurrently-fused-genes-bysample.tsv
pbta-fusion-starfusion.tsv.gz
pbta-gene-counts-rsem-expected_count.polya.rds
pbta-gene-counts-rsem-expected_count.stranded.rds
pbta-gene-expression-kallisto.polya.rds
pbta-gene-expression-kallisto.stranded.rds
pbta-gene-expression-rsem-fpkm-collapsed.polya.rds
pbta-gene-expression-rsem-fpkm-collapsed.stranded.rds
pbta-gene-expression-rsem-fpkm.polya.rds
pbta-gene-expression-rsem-fpkm.stranded.rds
pbta-gene-expression-rsem-tpm.polya.rds
pbta-gene-expression-rsem-tpm.stranded.rds

What release are you using?

V16

Put a link to the relevant section of the OpenPBTA-manuscript here.

NA

Put your question or report your issue here.

For a few samples in which polyA RNA-Seq was performed, new RNA was rRNA-depleted and sequenced as total, stranded and we will process and release these.

[jharenza]

For tracking:

PNOC samples:
BS_FXJY0MNH
BS_KABQQA0T
BS_D7XRFE0R
CBTN samples:
BS_SHJA4MR0
BS_HE0WJRW6
BS_8QB4S4VA
BS_FN07P04C
BS_SB12W1XT

[jaclyn-taroni]

Included in v18 release (#857)