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  1. The analysis repository for the Open Pediatric Brain Tumor Atlas Project

    HTML 67 52

  2. The manuscript repository for the Open Pediatric Brain Tumor Atlas Project

    HTML 9 21

  3. An unsupervised transfer learning approach for rare disease transcriptomics

    HTML 36 9

  4. Refine.bio harmonizes petabytes of publicly available biological data into ready-to-use datasets for cancer researchers and AI/ML scientists.

    Python 103 12

  5. A collection of modules that are combined into 1-5 day workshops on computational topics for the childhood cancer research community.

    HTML 25 11

  6. Example workflows for refine.bio data

    HTML 7 2

2,015 contributions in the last year

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Contribution activity

October 2021

Created a pull request in AlexsLemonade/OpenPBTA-analysis that received 2 comments

Create minimal main display item palette (#1176)

Purpose/implementation Section Addresses the new palette part of #1176. I haven't added documentation to the figures README yet. This is in part b…

+663 −730 2 comments
Reviewed 16 pull requests in 8 repositories
AlexsLemonade/OpenPBTA-manuscript 5 pull requests
AlexsLemonade/scpca-docs 3 pull requests
jaybee84/ml-in-rd 2 pull requests
AlexsLemonade/scpcaTools 2 pull requests
AlexsLemonade/scpca-portal 1 pull request
AlexsLemonade/2021-november-training 1 pull request
greenelab/RNAseq_titration_results 1 pull request
AlexsLemonade/scpca-nf 1 pull request

Created an issue in AlexsLemonade/scpca-docs that received 1 comment

FAQ: Why do some samples have missing participant IDs?

We currently only include participant IDs when it has been made clear to us that multiple samples come from the same participant.

1 comment
Opened 2 other issues in 1 repository
AlexsLemonade/scpca-docs 2 closed
48 contributions in private repositories Oct 1 – Oct 22

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