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Hi all, I'm having issues installing the allensdk, and it looks like it has something to do with statsmodels. I was able to get a working version of the allensdk by using -no-deps and installing lots of packages manually, but I'd rather not go that route. :)
If you run !pip install allensdk in Google Colab or in a fresh conda environment you will receive this error.
The bottom of the error message I receive is:
Collecting simplejson<4.0.0,>=3.10.0 (from allensdk)
Downloading simplejson-3.19.1-cp310-cp310-manylinux_2_5_x86_64.manylinux1_x86_64.manylinux_2_17_x86_64.manylinux2014_x86_64.whl (137 kB)
━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 137.9/137.9 kB 742.4 kB/s eta 0:00:00
Requirement already satisfied: scikit-image>=0.14.0 in /usr/local/lib/python3.10/dist-packages (from allensdk) (0.19.3)
Collecting scikit-build<1.0.0 (from allensdk)
Downloading scikit_build-0.17.6-py3-none-any.whl (84 kB)
━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 84.3/84.3 kB 8.8 MB/s eta 0:00:00
Collecting statsmodels<=0.13.0 (from allensdk)
Downloading statsmodels-0.13.0.tar.gz (17.8 MB)
━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 17.8/17.8 MB 26.2 MB/s eta 0:00:00
Installing build dependencies ... done
error: subprocess-exited-with-error
× Getting requirements to build wheel did not run successfully.
│ exit code: 1
╰─> See above for output.
note: This error originates from a subprocess, and is likely not a problem with pip.
Getting requirements to build wheel ... error
error: subprocess-exited-with-error
× Getting requirements to build wheel did not run successfully.
│ exit code: 1
╰─> See above for output.
note: This error originates from a subprocess, and is likely not a problem with pip.
The text was updated successfully, but these errors were encountered:
Hi all, I'm having issues installing the allensdk, and it looks like it has something to do with statsmodels. I was able to get a working version of the allensdk by using
-no-deps
and installing lots of packages manually, but I'd rather not go that route. :)If you run
!pip install allensdk
in Google Colab or in a fresh conda environment you will receive this error.The bottom of the error message I receive is:
The text was updated successfully, but these errors were encountered: