remove conda yml

AndersenLab · May 12, 2023 · 7289652 · 7289652
1 parent 50e4b0e
commit 7289652
Showing 1 changed file with 11 additions and 4 deletions.
diff --git a/env/Dockerfile b/env/Dockerfile
@@ -1,10 +1,17 @@
 FROM continuumio/miniconda
 MAINTAINER Katie Evans <katiesevans9@gmail.com>
 
-COPY conda.yml .
-RUN \
-   conda env update -n root -f conda.yml \
-&& conda clean -a
+#COPY conda.yml .
+#RUN \
+#   conda env update -n root -f conda.yml \
+#&& conda clean -a
+
+RUN conda install -c bioconda bcftools=1.9
+RUN conda install -c conda-forge pandoc=2.12
+RUN conda install -c bioconda plink=1.90b6.12
+RUN conda install -c bioconda bedtools=2.29.2
+# RUN conda install -c conda-forge r=3.6.0
+
 
 
 # install other tools not avalible on conda cloud